Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3701 |
Symbol | |
ID | 3522398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3851486 |
End bp | 3852265 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637286149 |
Product | hypothetical protein |
Protein accession | YP_270369 |
Protein GI | 71281926 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CACCTAAACT CAGTGTGCAA CTTTGGTCTG TCAAAGATGC CATTAACCAA GACTTTAATG GCACACTTAA GACGTTATCT AACATGGGTT TTGACGGTGT TGAGTTCGCC GGTGAATTAG GCTCATATGC GAATGATGCC AAAGCATTAA AACTCTTTTT AGATTCAATT GACCTAAAAG CCAGCGGCGC TCACGTATCT TTTGAACAAT TGGATCAAGA CAACTTTCAA AAAACTGTAG ATTTTTATCA TCAATTGCAA GTTGATACCT TGATCATTGG TTTGGATGAC AGATCTTGGC ATCCGCAAGG TATAGAAGAG GTGGTAAAAT TACTCAATCA ACTTGATACA AAGCTAGATC CTTATAATAT AAAAACCGGT TTTCATAATC ATGAACACGA ATTTGATAAC TTTAAAGGCA CTACTTACTG GGACTATCTA GCCATGAATA CTAAGGATTC CGTCGTATTA CAACAGGACG TAGGTTGGAC AACATATGCA GGTAAAGATG CCGTAGAGTA TGTTTATAAG TACCCTAATA GAAGCTTTAC CACGCATTAT AGAGTATGTA TTCCCGAAGG AGTTAAAGGT AAACAACCTA TTATTGGTCG AGATACAATT GATTGGCTGA GGCTGTTAAA GGCTAATATA AATGTTGGCG GGACAAAATG GATAGTTGTT GAGCAAGATG TATACCCCAA TGGCATGAGT TCTTTAGCAG CAGTTGCCTT GTCTAAAAAT GGATTAGAGC AATATATCGA TAAACTTTAA
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Protein sequence | MKKTPKLSVQ LWSVKDAINQ DFNGTLKTLS NMGFDGVEFA GELGSYANDA KALKLFLDSI DLKASGAHVS FEQLDQDNFQ KTVDFYHQLQ VDTLIIGLDD RSWHPQGIEE VVKLLNQLDT KLDPYNIKTG FHNHEHEFDN FKGTTYWDYL AMNTKDSVVL QQDVGWTTYA GKDAVEYVYK YPNRSFTTHY RVCIPEGVKG KQPIIGRDTI DWLRLLKANI NVGGTKWIVV EQDVYPNGMS SLAAVALSKN GLEQYIDKL
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