Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3696 |
Symbol | |
ID | 3522928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3841011 |
End bp | 3843419 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637286144 |
Product | cyclic beta 1-2 glucan synthetase domain-containing protein |
Protein accession | YP_270364 |
Protein GI | 71282454 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3459] Cellobiose phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAT TACCTTTATT CAGTATTGAT ACTGCAGTTG ATGGCTTGAG CAATATAAAG CTTACCAGTC CAACGACGTT ACCTAATGCA ACCGGGTTTT TATGGAACCG CGCCATGGTT ATGCAAGTGA ATTGTCGGGG TTATGTCAAT TCACAGTTTA TGCAGCCAGA GCCTGCTAAA TACTCTTACG CGCCGAACAT GGAAGCTAAA AGCTTTATTC AACCAGAGCA TAGTTATTTC AGTCATCACC CTGGGCGATT TTTTTACCTT AAGGATGAAG ACAGTGGTGA GATCATTTCA CTGCCTTACG AGCCGATGCG CGTTCAACTT GATAAGTTTT CTTTCGAGTT AGGCAATAGT GATATTATTT GGTCAATTGA ACACCATGGT TTGAAGATAA CCATTAAAGT TAATTTAACA GAGGATGATT TAGTTGAATG CTGGTTTTTT TCGGTAACCA ATTTAACGGA TACCGTTAGA AATATTAGTC TCTATCCGTA TTTCTCTATT GGTTATATGT CATGGATGAA TCAATCGGCT TGTTATAACG AAGCGTTAAA TGCCATTGTT GCTGAGTCTG TTACGCCCTA TCAAAAAGTG GCGGATTACT TTACTAATAA GCAGTTAAAA GATAAAACCT TTTTTTTGAG TGATACCATT CCTACGGCGT GGCATGCCAA TCAAAAAGAC TTTGAAGGGG AAGGTGGCCT GCATCAACCG AGTGCATTAC AGGCTGCGCT ATTAGAAAAT GTTGAAGCGC GTTATGAAAC CCCAGTTGCT GTTATGCAGT TTCAACAGAC GTTATTACCT AGTGAACAGA AAAACTATCA ATTTCTCTTT GGACCCGCAA AAAATGAGTT AGAAATAGCT GATATTAAAG AAAAGTATCT GGGTCATCAG CAACGAAATA AAGCAGAACA ATCCTATCGA GATTATATTG CTAAAGGCAA AGCATGTTTA AGCATTAATA GTGGTAATGA CGGCTTTGAT GATTTTTTTA ATCACTGGTT ACCAAGACAG ATGTTTTATC ATGGTGAGGT TAACCGATTA AGCACGGACC CTCAAACGAG AAACTATATC CAAGATAATA TGGGCATGGC TTTTATTAAT CCAGAGCGAA CTCGTCAAGC TTATATCTTA GCGGTTTCCC AACAAACCAT TAATGGTGCT ATGCCAGAGG GGGTGTTGTT ACATGCAGAT GCGAAACTTA AATATATTAA TCAAGTACCG CATGCGGACC ATGGTGTTTG GTTGCCGATA TGCCTGTCAG TTTATTTAAA CGAAACGGCT GATGTCAGCT TACTCAGTGA AATGATTACT TTTGCTGATT CAGAAGAGAA GCAATCTTTT GCTCGTCATA TAGAGTTAGC ATTGGATTAT CTGATTAATG CTAGCGATCA TCGCGGTTTG AGTTTTATTG AGCAAGGTGA TTGGTGCGAT CCAATGAATA TGGTTGGTTA TAAAGGCAAG GGCGTTTCTA CTTGGTTATC TTTAGCAACA GCCTATGCAC TAAACACTTG GTGCGAACTT TGTGAAGAAT ACGACATTTC CATTAGCCGA CAAAAATATA ATGAATATCG TTTTGCAGCC AAAGCCATTA ATAGCTCAGT AAATAAGCAC TTATGGCATG GTCAATGGTT CGCTCGTGGT ATTACCGATG ATGGCCGTGT TTTTGGTACT GATGAGGATG TTGAAGGAAA AATATTTCTT AACCCTCAAA GTTGGGCCAT GCTCAGCGGG GCCTCAAATG AGTTTCAGCA AGTCGAGATG ATTACGGCTA TCGCTAAGCA GTTAATTTCA CCGCAAGGCG TAATGATGCT GGCGCCAAGT TATACCAGTA TGGTGGAAGA TATTGGTCGT ATTACGCAAA AACATCCAGG GGTGTCTGAA AATGGCTCCG TTTATAATCA CGCGGCAATA TTTTATATTT ACGCGCTTTA TCAAGCCGGG CACAATAATT TAGCGTTTGA AATGCTCAGT AAAATGTTGC CATCCCTTGA TAATGCTGAA GTAACCGGGC AGTTACCTAT CTATGTACCT AACTATTATC GCGGGGCTTA TCACCAGTTT CCGAAAAAAG CAGGTCGTTC GAGTCATTTA TTTAATACCG GTACCACATC TTGGTTATAT CGTTGTTTAG TGGAGGAGTT GTGTGGCTTA AAGGGCTGTG CTCGCGGTTT ACACCTAGCG CCGAAAATGC CAGTAACCTT GCCAAATTTA TCTGGTCAGC GGCTGTTTAG GGGAGCAATG GTAAATTTTG ATATTGAGCA AACCAGCGAT ATTAGCATCA TGGAAGTATT ACTCGATAAG CAAGTCATCG TTGGCAATAT ATTAACTGGC TTACAGGCAG GACAACATTA TCAGTTACAA GTGAGGGTTC CCATGACCAA TGAGGATGAC GTTAAATGA
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Protein sequence | MSKLPLFSID TAVDGLSNIK LTSPTTLPNA TGFLWNRAMV MQVNCRGYVN SQFMQPEPAK YSYAPNMEAK SFIQPEHSYF SHHPGRFFYL KDEDSGEIIS LPYEPMRVQL DKFSFELGNS DIIWSIEHHG LKITIKVNLT EDDLVECWFF SVTNLTDTVR NISLYPYFSI GYMSWMNQSA CYNEALNAIV AESVTPYQKV ADYFTNKQLK DKTFFLSDTI PTAWHANQKD FEGEGGLHQP SALQAALLEN VEARYETPVA VMQFQQTLLP SEQKNYQFLF GPAKNELEIA DIKEKYLGHQ QRNKAEQSYR DYIAKGKACL SINSGNDGFD DFFNHWLPRQ MFYHGEVNRL STDPQTRNYI QDNMGMAFIN PERTRQAYIL AVSQQTINGA MPEGVLLHAD AKLKYINQVP HADHGVWLPI CLSVYLNETA DVSLLSEMIT FADSEEKQSF ARHIELALDY LINASDHRGL SFIEQGDWCD PMNMVGYKGK GVSTWLSLAT AYALNTWCEL CEEYDISISR QKYNEYRFAA KAINSSVNKH LWHGQWFARG ITDDGRVFGT DEDVEGKIFL NPQSWAMLSG ASNEFQQVEM ITAIAKQLIS PQGVMMLAPS YTSMVEDIGR ITQKHPGVSE NGSVYNHAAI FYIYALYQAG HNNLAFEMLS KMLPSLDNAE VTGQLPIYVP NYYRGAYHQF PKKAGRSSHL FNTGTTSWLY RCLVEELCGL KGCARGLHLA PKMPVTLPNL SGQRLFRGAM VNFDIEQTSD ISIMEVLLDK QVIVGNILTG LQAGQHYQLQ VRVPMTNEDD VK
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