| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3538 |
|---|
| Symbol | xni |
|---|
| ID | 3522688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3679020 |
|---|
| End bp | 3679892 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637285986 |
|---|
| Product | exonuclease IX |
|---|
| Protein accession | YP_270212 |
|---|
| Protein GI | 71282215 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGCTC ACTTAATACT CATTGATGCT CTAAATTTAA TTCGTCGTGT GTACGCTGTA
CAAGAGCGTC CTTTTATCCA AATAAAGCAG GATCACGACG ATGAGCTATC AGCCAGCACC
TTAAAACAAG TACTATTTAA TACGCAAAAT ACCTGTGTAA ACGCTTTAAT AAAAATTATC
GACCAACATC AGCCGACGCA CGCATTGACT GTATTTGATA GTCAAGAGCC CTGCTGGCGG
TATCAATTAT TTGAGGGGTA CAAGAAAGGC AGAAAGAAGA TGCCTGATCA CCTTGCAAAT
AAATTAATTG ATATACAAGA TGCTTTTATG GAACAAGGTG TTGATTCACT GACATCAGAC
GAAGATGAAG CTGATGATCT TATCGCTACT TTAGCGGTGA AGATGGCACT TCACGGTCAA
AAAGTGACTA TTATTTCGAC CGATAAAGGT TTCCTACCTT TACTTAGCCC TAACATACAT
ATTTATGATT ACTTTAATCG CCGCTATTTG GATGAAGAAC ATGTTCAAAG TAAGTTTAGT
GTTAAGACGT CTCAACTGAT AGATTTTTGG ACGCTAACTG GCGATAATAC CAATAAAATT
GAAGGTGTTA GTGGTATTGG CCAAGTTACT GCAGCAAAGT TACTTAACCA ATATGGTTCA
TTGAAGGCGA TACTTGAAGC GACTGATTTA AAAGACTCGC TTGCAGAGAA GTTAACACAA
AGCCTCGAAC AGATGGATTT GGCAAGAAAG CTATTAACAT TGAAACAAGA TATCCCTTTA
GGCTTTAATT TAAAAGATAT CCGCTTAACA ACCTCTTCAT CTGCCCACGA GATTAATGCT
AATATAAACC TAACTACTGA TGATAAAAGT TAA
|
|---|
| Protein sequence | MSAHLILIDA LNLIRRVYAV QERPFIQIKQ DHDDELSAST LKQVLFNTQN TCVNALIKII
DQHQPTHALT VFDSQEPCWR YQLFEGYKKG RKKMPDHLAN KLIDIQDAFM EQGVDSLTSD
EDEADDLIAT LAVKMALHGQ KVTIISTDKG FLPLLSPNIH IYDYFNRRYL DEEHVQSKFS
VKTSQLIDFW TLTGDNTNKI EGVSGIGQVT AAKLLNQYGS LKAILEATDL KDSLAEKLTQ
SLEQMDLARK LLTLKQDIPL GFNLKDIRLT TSSSAHEINA NINLTTDDKS
|
|---|
| |