| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3515 |
|---|
| Symbol | |
|---|
| ID | 3520794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3654344 |
|---|
| End bp | 3654865 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637285963 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_270189 |
|---|
| Protein GI | 71280329 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2983] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.529376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATA AAAACACACA AGAAAACCCA TTTTGGCAAA CTAAAAGCTT AGCGGAAATG
ACTCGCCCCG AATGGGAGTC ATTATGCGAT GGCTGTGCTA AATGTTGCTT AAACAAGTTT
ATTGATGATG AAGATACTGA TGATGATTCG GAGCTGTTGC CGACCGATCA TATAAAAGAA
GGTGAGCACA TTTTTTACTC TAATATTGCT TGTCACTTAC TTAATGAAAA ATCTTGTCAA
TGTTCTAAAT ATGAGCAACG GACAACGTTA GTACCTGATT GTGTTCGTTT AACACAAGAG
AATATTGATG CGGTATTTTT CATGCCGCCT AGTTGTACTT ACCGTCGCCT GCAAGAAGGG
CGTGGCATGC CATCATGGCA TCCTCTTCTA CATAAAGGTA AAAAGTCTGC TATGCATAAA
GCAGGTATGT CGGTAAGAGG GAAAATAGTT AAAGATAATG AAGTCAGTAT TGAAAATTTT
GAAGATCACA TTGTCATTTG GCCATTGAAT GATATTGATT AA
|
|---|
| Protein sequence | MIDKNTQENP FWQTKSLAEM TRPEWESLCD GCAKCCLNKF IDDEDTDDDS ELLPTDHIKE
GEHIFYSNIA CHLLNEKSCQ CSKYEQRTTL VPDCVRLTQE NIDAVFFMPP SCTYRRLQEG
RGMPSWHPLL HKGKKSAMHK AGMSVRGKIV KDNEVSIENF EDHIVIWPLN DID
|
|---|
| |