| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3465 |
|---|
| Symbol | |
|---|
| ID | 3522050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3602099 |
|---|
| End bp | 3603430 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637285913 |
|---|
| Product | Na+/H+ antiporter family protein |
|---|
| Protein accession | YP_270139 |
|---|
| Protein GI | 71281578 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0575071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA AAAATGCCCC CCAAGAAAAC TTATTTGCCC TACTCCCATT TGCCATTTTT
TTAGGGCTAT TTCTCGGTAC TGGTATAATT TTAACTCTAC AAGGTGTTGA TTTTGCTTTT
TATCAACTAC CGGCAAGTAT TGCTATTATC CCGGCTATTA TCGTCTCGAT TGGCTTAGGA
AAGTACCTAT CTAAAAGTAC AATTGAAAAG CAAGTAGAGC AATTTATCCG CGGTGCAGGT
AATAGCAACA TAACAACCAT GTGTATTATT TATCTTCTTG CTGGTGCTTT TTCCGTGGTT
GCAAAAGCAA CTGGCAGTGT TGATGCCAGC GTACAGCTTG GCTTAGCTGT ATTCCCTGAT
TATCTACTAC TGCCGGGGTT ATTTTTAGTC GCTGCGTTCT TATCTACCGC AATGGGAACA
TCTATGGGCA CAATTGCTGC TATAGCACCT GTTGCACTAG GATTTATTGA AACGGCAAAC
TTAGATGCTG CACTCGTCGC TGGCTGTCTG ATTTCGGGCG CTATTTTTGG TGATAACTTG
TCAATTATTT CTGATACCAC TATCGCTTCT ACGCGTAGTC AAGGCGCGCA GATGAAAGAT
AAGTTTCGTG TTAACTTTAA ATTTGCCGTT CCTGCAGCCC TTATTTGTTT GGTGATATTT
ACAATATTAG GCGGCGAAGT AAGCCATGAG TTGAGCAACG AGTCTGCTCT TATTGGTTTA
ATTCCTTACG TAACTATTCT TGTACTAGCC TTGATGGGAG TGAATGTTTT TGTGGTCTTA
ACATTGGGCA TAGTGCTAGC TGCAGCAATT GGTATGATTA GTAATGGCTA CCAGTTATCC
GCTTGGTTAA AAGACATTAC TGCTGGATTT TCTAGTATGC AAGACATCTT TCTATTATCC
CTTTTTATTG GTGGTTTAAG TGAATTAGTT CGTCAGCAAG GTGGTTTAGC CGCGTTAACG
CGTGTTATAG AAACACTTGC CAGAAAACTG ACCCCCAATA ATAAGCGGCG AGCAGCGGGT
TTAGGTATTG CTGGACTTGC CTTTATTTGT AATTTCTTCA CTGCAAACAA TACCGTATCA
ATTATAGTCA CGGGTGATAC TGCTAAGAAC CTTGCTACTG ATGGCGAGTT ATCCCCTGCT
GAATCAGCCA GTTTACTCGA TGTTTTTGCT TGTATTAACC AAGGTATGCT ACCGTACGGA
GCCCAAGTAC TATTACTTGG CGCTACTTTA CATATTTCGC CACTATCTGT AGCAAGCCAT
TCTTTTTACC CTATGGTTTT ATTTTTTGCC GCTGGTTTCT CTTTTTGGCG ATTAACAAGT
AATACTAAAT AA
|
|---|
| Protein sequence | MTEKNAPQEN LFALLPFAIF LGLFLGTGII LTLQGVDFAF YQLPASIAII PAIIVSIGLG
KYLSKSTIEK QVEQFIRGAG NSNITTMCII YLLAGAFSVV AKATGSVDAS VQLGLAVFPD
YLLLPGLFLV AAFLSTAMGT SMGTIAAIAP VALGFIETAN LDAALVAGCL ISGAIFGDNL
SIISDTTIAS TRSQGAQMKD KFRVNFKFAV PAALICLVIF TILGGEVSHE LSNESALIGL
IPYVTILVLA LMGVNVFVVL TLGIVLAAAI GMISNGYQLS AWLKDITAGF SSMQDIFLLS
LFIGGLSELV RQQGGLAALT RVIETLARKL TPNNKRRAAG LGIAGLAFIC NFFTANNTVS
IIVTGDTAKN LATDGELSPA ESASLLDVFA CINQGMLPYG AQVLLLGATL HISPLSVASH
SFYPMVLFFA AGFSFWRLTS NTK
|
|---|
| |