Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3310 |
Symbol | |
ID | 3521666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3432261 |
End bp | 3432971 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637285759 |
Product | putative phosphonate ABC transporter, ATP-binding protein |
Protein accession | YP_269986 |
Protein GI | 71281195 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCACCC TTGACAACCT AAACCTTCAT TATGATAAAA CTGCTGGTTA TAATATCGGT AAGTACACCG GTAAAAAGAA GGCGTCTACT CAGGTGATTT TTGATCTGAG CCTGACAATT AATGAAGGTG AAAAGGTTGC CATTATCGGT CCCTCTGGTG CTGGTAAATC TAGTCTGCTA CATCATATTT ATCAACAGTT ACAAACCAGT GCAGCCCTGT GCTCACAGCG ACAAGGTTTG GTTGATAATT TAAGCATTTA TCACAATATA TTTATGGGTG CTTTAGCTCG ACACCACTGG TTATTTAACT TAGTGAATTT AATCAGGCCT TTCAAAAAAG ACTTAAACGC TATTGCTGAA CTTTGTCAGC AGTTGGAATT AGACCAGCCA TTGGCAAAAA AAGTGGACCA ACTCTCTGGT GGGCAAAGGC AACGAGTGGC GTTAGCAAGA GCTATGTATC AACAACAAGA TACCTTTATC GGTGATGAGC CTTTTTCAGC GCTGGACCCA TTGATGAAAT CAAGACTACT CGACATCGTA TTAGCACAGC ATAAGAGTGT CATCATGGTA GTTCATGACA GAGAGTTGGC GATTAACGCT TTTGACCGCG TTATCGCATT AGATAAAGGC CATATGGTAC TCGATAGCCA ACAGCAGAGT ATCGGTCACC AACAGATCAC AGCGTTATTT CAAACTAACG CTGTCGCGTA G
|
Protein sequence | MLTLDNLNLH YDKTAGYNIG KYTGKKKAST QVIFDLSLTI NEGEKVAIIG PSGAGKSSLL HHIYQQLQTS AALCSQRQGL VDNLSIYHNI FMGALARHHW LFNLVNLIRP FKKDLNAIAE LCQQLELDQP LAKKVDQLSG GQRQRVALAR AMYQQQDTFI GDEPFSALDP LMKSRLLDIV LAQHKSVIMV VHDRELAINA FDRVIALDKG HMVLDSQQQS IGHQQITALF QTNAVA
|
| |