Gene CPS_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3225 
Symbol 
ID3519005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp3353344 
End bp3354036 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content39% 
IMG OID637285674 
Productputative lipoprotein 
Protein accessionYP_269915 
Protein GI71278398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.243823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAC AACAAGGTCT TAAATTGAGC TTTATCGCTT TAGCCGCATC ATTGGTTATT 
GGTTGTAATT CTACCAACCC AACCAATGCA CCTCAAGTCT CGCCAGAAGG CATGGAGTTG 
AAAAAATCAA CACGCTCAAC GGTTGCTTAT AAAAAGGAAG GTGTTGATTT TTCAGAGTAT 
GACAAAGTAC AAATACTCCC TAGTGCAGTT GCTTTTAAAA AGAACTGGAA GCGCGATTAC 
AATAGAGATC AGGTCTCATT ATCGACACGG ATAAATGATG CTGATGTAAT ACGTATGAAA 
GCTGAAATGG CTGAATTATT TGATGAAGTC TTTAAAGAGG AGTTTGGTAA AGATGCTAAC 
TTTTCTCTCG TTGATAAAGT AAGTTCTAAA ACCTTAGTTG TAAGACCTGC CATTATCAAT 
TTAGATGTTT CAGCCCCCGA TATGAGATCA GCGATAAACG TAAAAACCTA TGCCGATGAT 
GCAGGACAAG CGACCTTATT TATTGAGCTT TATGACGGTG TCAGTGGCGA AATATTAGCC 
CGTGCTGTTA ACACTGCGGT CGCAGGAGAT AATAGTTATC ATCAGTGGGC AAATCGTGTA 
TCTAATCGTG CAGATGCGAA GCGTATGATC AGAAAATGGG CCAAAGCATT GAGAATTAAA 
TTTGATGAAG CTCATATGCC AAAAACTAAT TAG
 
Protein sequence
MTKQQGLKLS FIALAASLVI GCNSTNPTNA PQVSPEGMEL KKSTRSTVAY KKEGVDFSEY 
DKVQILPSAV AFKKNWKRDY NRDQVSLSTR INDADVIRMK AEMAELFDEV FKEEFGKDAN 
FSLVDKVSSK TLVVRPAIIN LDVSAPDMRS AINVKTYADD AGQATLFIEL YDGVSGEILA 
RAVNTAVAGD NSYHQWANRV SNRADAKRMI RKWAKALRIK FDEAHMPKTN