| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3215 |
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| Symbol | |
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| ID | 3520324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3347779 |
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| End bp | 3349125 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637285664 |
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| Product | putative ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_269911 |
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| Protein GI | 71279863 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.571925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAATTTA GTGATTTTGG TTTAGACAGT GCTTTAATGA GTACCATTGA GCATATGGGT
TTTAACGAAC CAACACAAAT TCAGCAACAG GCGATTCCTG CGGCAATGGC GGGGCATGAT
TTAATTGCTT CGTCTAAAAC AGGTTCAGGT AAAACGTTAG CGTTTATTAT TCCTGCTTTA
CAGCGATTAA GTAAAAATCG TGCTCTGTCA AAGCGTGATC CACGTGTGGT AATTTTAACG
CCAACACGTG AATTAGCTAA ACAAGTTTTT AGTCAACTGC GTTTGTTTAC GGCGAATACT
CAATATAAAG CGGTATTAAT TTTAGGTGGT GAAAACTTTA ACGACCAAGT AAAAGTTTTG
CAGAAAGAGC CTGAGTTTAT TGTTGCAACA CCTGGACGCT TAGCAGATCA TTTAACGCAA
GGTCACTTCC ATTTAAATGG TTTAGAGCTA CTGATTTTAG ATGAAGCTGA TCGCATGCTT
GATTTAGGTT TTAGTAAAGA GCTAACTCAA ATAAATAAGG CTGCCGATCA TCGTAAACGT
CAAACGTTAC TGTTTTCAGC AACCTTAGAT CACGCGCAAG TGAATGAGTT TGCCACTGAA
TTGCTTACTA AGCCTAAACG AATTGCTATT AATGCTGGGC ATAGTGAGCA CGTAGATATT
GCTAAACGCT TTTACCTTGC CGATAATCTC ACGCAAAAAG AAGCACTATT ACAGCACTTC
TTAGTCACTG AGAAATCACA ACAAATCATT ATATTTACTG CAACACGAAG TGATACTGAT
CGTTTAGCTA AACTACTTAC TGAGCAAAAT CTTAATGCTG TTGCTTTAAG TGGTGAGTTA
AACCAAGGTC AACGTAATCA AATTATGGAA AGCTTTTCTA AAGGCCAACA TAAAATATTG
GTAACGACAG ATTTAGCCTC ACGTGGCCTT GATTTAATCA ATGTATCGCA TGTAATCAAT
TTTGATATGC CAAAGCATAC GGAAGAGTTT GTTCACCGTA TTGGCCGTAC CGGTCGTGCA
GGAACGAAAG GTGATGCTAT TTCATTAGTC GGACCAAATG ATTGGCTAAG TCTTAAAAAC
GTAGAAGCTT TTCTACAACA AAAAATCAGC TTTACTAAAG TTGAAGGTAT TAAAGTTAAG
TTTAAAGGCT TAAAACCGAA AAAAGAAAAA GCAGTAAAAG CTAAAGTTAG TGTTGCTAAA
GATAAAAAAG CTGTGTCGAA CAAACCAAGA AAAGTTATTA AGAAAACTTT CCTTGATATA
GAGGATGCTG GCGCAATGAA AATTATTAAA CGCAAGAAGT TAACACCAGA TCAAATTGAA
GATGCGACTA AAAAAGAGCA GGATTAA
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| Protein sequence | MQFSDFGLDS ALMSTIEHMG FNEPTQIQQQ AIPAAMAGHD LIASSKTGSG KTLAFIIPAL
QRLSKNRALS KRDPRVVILT PTRELAKQVF SQLRLFTANT QYKAVLILGG ENFNDQVKVL
QKEPEFIVAT PGRLADHLTQ GHFHLNGLEL LILDEADRML DLGFSKELTQ INKAADHRKR
QTLLFSATLD HAQVNEFATE LLTKPKRIAI NAGHSEHVDI AKRFYLADNL TQKEALLQHF
LVTEKSQQII IFTATRSDTD RLAKLLTEQN LNAVALSGEL NQGQRNQIME SFSKGQHKIL
VTTDLASRGL DLINVSHVIN FDMPKHTEEF VHRIGRTGRA GTKGDAISLV GPNDWLSLKN
VEAFLQQKIS FTKVEGIKVK FKGLKPKKEK AVKAKVSVAK DKKAVSNKPR KVIKKTFLDI
EDAGAMKIIK RKKLTPDQIE DATKKEQD
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