Gene CPS_3193 details

Gene Information

• Locus tag: CPS_3193
• ID: 3521681
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3322616
• End bp: 3324559
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637285642
• Product: putative lipoprotein
• Protein accession: YP_269889
• Protein GI: 71281210

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.52328
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTGTG ATTTTGTAAG AGCCTCGTTG TTATTACCCC TATTTCTCAC AGTAGTACTG 
ACTGCTTGTG ATAGTAAATC TGATGGTAAT GTGACGAATT ATCCCCTTGA TAGCATAGTA 
CAGCTTGATA AGGTGCAAAA TGTAAATCAA AGCATAGATC TCCTTCTTCA CTTCCCTTTT 
GATGTCGTTA GTCAAATAAA ATGGCAACAA ACGGCTGGCG AGCCGGTAGT AATTTTAGCA 
AAAACGAGTA AAGTTATTTC TTTTACGCCT ATGCTAGCAG GCGATTACAG TTTTAGTGTC 
AGTTTTGTTC TCAATGATGG CATCGAGCAA ATATTAAAGA AGAATATAAC GGTTAATGAT 
AACAATCATA AGTTAACCAC ACGTCTATCT CATGAAGCTT TAGCAGGTAA TAAGGTGTCA 
CTTCGTAGCC AACTTTCTGA AACGATTGAT ATCAACACGT TAACATGGCA ACAAATAGAA 
GGTCCTAGTG TCACCCTAAC CGCTGATAGT GGTGGTGAGT TAGCACTTTT TTTTGATGCT 
CCCCAAGTTG ATGTCGATAC CATTATTACC TTCGAGGCAT CCGCCACAGA TTCTGACAGT 
AATACCATTT ATCGTGATCA GGTAGCGATA CTCGTAGAGC CAGCTGCGGA AATAGGCAGT 
AATGCTTACT TTTCAGAGCG TAAAGCATCG GTTTTCGCTT ATAACAGCAA TAGCCCTTAT 
GTTGATGATC TTGTTACTTG TATTTACTCT AATACCTTAA CCAGTTCATG TACTTTGTCC 
CAAACACCTC TAATTGCAGA GGAAGTAAAA AGTTCATCAA TGACACCTTC AATAGAGAGT 
ATTATGGATC GTGTTGTGGT ATCCCACCAT TGGATGGGTG ATAGATTTAA AGACTTTCTG 
AGTAATAATG ATACCAACAA CGATATCAAA AATTTGCTTA GAGCGACGAC AGCAATTGTT 
ATTTCTTATG ATGTGCGCCC TTCATTTTAT TGGGCGGCGA CAGGTGCCAT ATATTTAGAT 
GCAGAAAATT TTTGGTTAAC TCCACAAGAG CGCGATACGA TAAATGAAGC ACCCGATTAT 
CGGGCTGACT TTGGTAAAGA CCTACAGTTC ACTATGCCTT GGCGGTACGT AAAAGATAAT 
GCCTCTGCAA GTAAAAGTTA TAGTAAATCT GCACGGGTCA CTCGAACAGC TACAGATGCT 
CTATATCGCT TAACATCATT AATGTACCAT GAACTTGCTC ATGCCAATGA CTTTTTCCCA 
AGTAACGAAT GGTATGTACA TAGCAGCAAT CAACGTGTGC TCGATGCAGC TGTCAGTACG 
ACGTTTGAAT CAGATGAACT TGCTATTACC TATCCACTAA AAAGCCAAGA AATGCGTGAT 
TTAGCGCAAG TTAGTTTTAC TGGCGAGACC GCCAACCAGA CACAAAAAAA CTACTTACCA 
ACAGATATTG AAGTTTTTTT TAGTCCAGAA GGTGCCTCAG ACTTTTATGC TTACTCGAGT 
TTACGTGAAG ATTATGCCAT GTTGTTTGAA GAGTTAATGA TGCAAAGCCG CTTTGCAGTA 
ATACGTGATG TTGCCATTAC CAATCAGCCA ATAGGTGAAA GTATTTCCGC AGCTGATTAT 
ATTGTCACTT GGGGACAACG TGGCCGCATT GGTGACGATA AGTTAACAGA TAGAGTACTT 
TTTAGTGCTA GTCGTGTATT ACCCGAGTTT GATAGCCAAG CGGCAATAAA CTTAGTACCT 
ACTCCTATAG AAATGGTTGA AGGAAGTAAT TGGTTTGATA ATTTAACTAT TAGCCCAATA 
GGAGCAAATG TTAGAAAAAT GATGGGACAA CGAAACAGCG TCTCAATTTT TACAGAATTT 
GCACAGCCAT CGTCAGCAAA CATTACACCT GAACAAGAAA ATAATTTTAA TCGGTATTAT 
CAAAAACCTT TACCTCTGCA CTAA 

 

Protein sequence

MRCDFVRASL LLPLFLTVVL TACDSKSDGN VTNYPLDSIV QLDKVQNVNQ SIDLLLHFPF 
DVVSQIKWQQ TAGEPVVILA KTSKVISFTP MLAGDYSFSV SFVLNDGIEQ ILKKNITVND 
NNHKLTTRLS HEALAGNKVS LRSQLSETID INTLTWQQIE GPSVTLTADS GGELALFFDA 
PQVDVDTIIT FEASATDSDS NTIYRDQVAI LVEPAAEIGS NAYFSERKAS VFAYNSNSPY 
VDDLVTCIYS NTLTSSCTLS QTPLIAEEVK SSSMTPSIES IMDRVVVSHH WMGDRFKDFL 
SNNDTNNDIK NLLRATTAIV ISYDVRPSFY WAATGAIYLD AENFWLTPQE RDTINEAPDY 
RADFGKDLQF TMPWRYVKDN ASASKSYSKS ARVTRTATDA LYRLTSLMYH ELAHANDFFP 
SNEWYVHSSN QRVLDAAVST TFESDELAIT YPLKSQEMRD LAQVSFTGET ANQTQKNYLP 
TDIEVFFSPE GASDFYAYSS LREDYAMLFE ELMMQSRFAV IRDVAITNQP IGESISAADY 
IVTWGQRGRI GDDKLTDRVL FSASRVLPEF DSQAAINLVP TPIEMVEGSN WFDNLTISPI 
GANVRKMMGQ RNSVSIFTEF AQPSSANITP EQENNFNRYY QKPLPLH