Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3133 |
Symbol | folD1 |
ID | 3521491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3268180 |
End bp | 3269028 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285583 |
Product | FolD bifunctional protein |
Protein accession | YP_269830 |
Protein GI | 71281022 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.203744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGCAT TGATTCTAGA TGGGAAAAGC GTTACTAAAA AGTCTGAAGA AGATTTGCGC TCAAGAGTTG CACGCCTTAA GGAATTGAGT AATGGTGCCG TTCCTATCTT AGCCACAATT CTAGTGGGAA ATGATCCTTC TTCGGCAACC TATGTAAAAA TGAAGTCGAA TGCTTGTACC CGAGTTGGTA TGGACTCGTT GAAAGTTGAA ATGTCTGAAG AAACAACGAC AGAAGAGCTA TTAGCTGAAA TTGCAAAACT AAATGCCAAT CCAAATATTC ATGGCATTCT TTTACAGCAC CCTGTGCCTC CACAAATTAA TGAAAGACAG TGCTTTGATT CCATAGATTT ATCTAAAGAT GTTGACGGGG TAACTTGTTG GGGTTTTGGT CGTATGGCAA TGAATGAAAC CTCTTATGGC AGCGCTACGC CAAAAGGAAT AATTCGAATT TTAGAGGCAT ATGATATTCA ACTAGAAGGT AAACATGCTG TTGTCGTTGG TAGAAGCCCT ATTCTTGGCA AACCAATGGC AATGATGCTG CTTAATAAAA ACTGCACGGT TACTATTTGT CATTCAAAAA CAGTTGGTCT TGATAAAATC ATCAAGACTG CTGATATCGT TGTAGGCGCT GTCGGTAAGC CTGAATTCAT CAAAGCTGAT TGGATTAAAG ATGATGCCGT AGTGATAGAT GCTGGGTATC ATGAAGGTGG TATCGGAGAC ATTGAGTTAC AGCCCCTTAT GAGTCGTGTT AAGGCATATA CTCCTGTACC TGGAGGTGTA GGGCCAATGA CAATAAATAC GTTGATCTAT CAGACTGTTG AAGCATGTGA GTTAAAATTA GCACAATAA
|
Protein sequence | MSALILDGKS VTKKSEEDLR SRVARLKELS NGAVPILATI LVGNDPSSAT YVKMKSNACT RVGMDSLKVE MSEETTTEEL LAEIAKLNAN PNIHGILLQH PVPPQINERQ CFDSIDLSKD VDGVTCWGFG RMAMNETSYG SATPKGIIRI LEAYDIQLEG KHAVVVGRSP ILGKPMAMML LNKNCTVTIC HSKTVGLDKI IKTADIVVGA VGKPEFIKAD WIKDDAVVID AGYHEGGIGD IELQPLMSRV KAYTPVPGGV GPMTINTLIY QTVEACELKL AQ
|
| |