| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3087 |
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| Symbol | |
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| ID | 3521486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3218751 |
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| End bp | 3219344 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637285538 |
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| Product | amino acid transporter LysE |
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| Protein accession | YP_269785 |
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| Protein GI | 71281017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0525749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGTTAT TGTTCGCAAT GTTTTCATTC TCATTGGCTA TGTCAATATC TCCTGGGCCT
GTGAATATGG TGATTTTATC TTCAGGAGCA AATTACGGAG TACGTAAAAC GTTTTCATTC
GTTTCAGGTG GAACGATTGG CTTCACATCA CTGTTATTAT TTATTGGATT AGGTTTTTAT
AAAGTTATTG ACTTGTATCC ATTATTGCTT AAATACTTAG CCATTTCTGG TTCATTATTT
ATTGTCTATA TGGGATATTT AATCGCATCT TCAAAGCCTA AACTAGATAT TAATGAACAA
AACCTACCCA CTTTTATGCA AGGTTTCCTT TTACAATGGT TAAATCCCAA AGCATGGATT
GCAAGTGTGT CGGGTGTTTC TTTATTTTCA GTGCCTGAGA ATAACCAGGT GTTTTTAACT
TTTTTACTTA TCTATTTTTT AGTCTGTTAT CTATCACTTT TTTCCTGGTC TGTATTAGGA
GATAAAGTCA CAATACTGTT GAGTAATCAA TTAAGGCTAA ATCTTTTTAA TCAATTAATG
GGCGGGTTAT TGATTGTGAC CGCATGTTTT TTACTCTATT CACAATTTAA TTAA
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| Protein sequence | MSLLFAMFSF SLAMSISPGP VNMVILSSGA NYGVRKTFSF VSGGTIGFTS LLLFIGLGFY
KVIDLYPLLL KYLAISGSLF IVYMGYLIAS SKPKLDINEQ NLPTFMQGFL LQWLNPKAWI
ASVSGVSLFS VPENNQVFLT FLLIYFLVCY LSLFSWSVLG DKVTILLSNQ LRLNLFNQLM
GGLLIVTACF LLYSQFN
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