13 homologs were found in PanDaTox collection
for query gene CPS_3019 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_3019  hypothetical protein  100 
 
 
191 aa  391  1e-108  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0620  hypothetical protein  36.51 
 
 
194 aa  111  7.000000000000001e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0647  hypothetical protein  36.51 
 
 
194 aa  111  7.000000000000001e-24  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3589  hypothetical protein  36.32 
 
 
197 aa  106  3e-22  Shewanella sp. ANA-3  Bacteria  normal  0.348708  normal 
 
 
-
 
NC_010506  Swoo_4278  hypothetical protein  36.26 
 
 
200 aa  103  2e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0534  hypothetical protein  37.31 
 
 
197 aa  98.6  6e-20  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4243  hypothetical protein  28.81 
 
 
206 aa  80.5  0.00000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.833111  n/a   
 
 
-
 
NC_004578  PSPTO_1175  hypothetical protein  27.47 
 
 
198 aa  77  0.0000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_49810  hypothetical protein  27.22 
 
 
195 aa  73.2  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4820  hypothetical protein  28.34 
 
 
227 aa  69.7  0.00000000003  Pseudomonas putida F1  Bacteria  normal  0.793839  normal 
 
 
-
 
NC_010830  Aasi_1361  hypothetical protein  37.65 
 
 
540 aa  58.9  0.00000005  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_010506  Swoo_2363  hypothetical protein  35.71 
 
 
1028 aa  53.9  0.000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.429657 
 
 
-
 
NC_008700  Sama_1597  hypothetical protein  29.67 
 
 
1042 aa  46.2  0.0003  Shewanella amazonensis SB2B  Bacteria  normal  0.229285  normal 
 
 
-
 
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