Gene CPS_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2979 
Symbol 
ID3520944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp3116352 
End bp3116939 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content35% 
IMG OID637285432 
Producthypothetical protein 
Protein accessionYP_269679 
Protein GI71280478 
COG category[S] Function unknown 
COG ID[COG3310] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.206371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG ACGAAGAGCA ATTAACAGAC CAACAATCAT CAGTGGAAGT TGATGCAACC 
AAACAATGGT TAGATGAAAT TATAATAGGA TTGAATTTTT GTCCTTTTGC GAAAAAAGAA 
TTTGTTAATA ACACTATTTG TTATTTTAAA TCGGAAGCTG AGCAAGTTAA ACCTGCTTTA 
CAAACAGTGA TAGAACAATG CCATTATCTA CAAAAACATG AAGAGATTGA GACGACTTTG 
ATCATCTTTG CAGAAGGATT TCGTCGTTTC GACCGCTACC TCGATTTAGT AGATTATGCC 
AATGACTCGC TGATTGATTC AGGTTTTGAA GGTATATTCC AGTTAGCAAC TATGCATCCT 
GAATACTGTT TTGCGGATGA TGATTTTGAT GATGCGAGTA ACTTTACCAA TCGTTCTCCT 
TATCCAATGC TGCATATTAT CCGCGAAGCA AGTATGGCCA GAGTATTAGC TGTGTATAAA 
GATCCTGAAA AAATACCTGA ACAAAATATG GCCTTAGCGG AGCAAAAAGG TAGTAATTAT 
TTTCAAGACG TTTTAAAACG CATACATCAA AATCACCCAC AAAAATAG
 
Protein sequence
MNKDEEQLTD QQSSVEVDAT KQWLDEIIIG LNFCPFAKKE FVNNTICYFK SEAEQVKPAL 
QTVIEQCHYL QKHEEIETTL IIFAEGFRRF DRYLDLVDYA NDSLIDSGFE GIFQLATMHP 
EYCFADDDFD DASNFTNRSP YPMLHIIREA SMARVLAVYK DPEKIPEQNM ALAEQKGSNY 
FQDVLKRIHQ NHPQK