| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2898 |
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| Symbol | rluE |
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| ID | 3520390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3032968 |
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| End bp | 3033573 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637285351 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_269599 |
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| Protein GI | 71279927 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAAA GCAAAGGCTA TACAAGACAT ACCGCTAAAA AGCAGCGAAA GGTACGACCA
CTTGATGAAA AGCAGATAGT CGTGCTTTTT AACAAACCGT TTGACGTGCT TTGTCAATTT
ACCGATGAGA ACAACCGTCG TACATTAAAA GATTTCATTA CCATACCAGG TATATATGCC
GCAGGAAGAT TAGATAGAGA TAGTGAAGGC TTATTGTTAC TTACCAATGA TGGAAAATTA
CAACATCAGA TTGCCAATCC AGTTAAGAAA ACAGAAAAAA CGTACTGGGT ACAAATTGAA
GGGGCGCCTT CAGAACAAGA TTTAGCAAAA TTACGTCAAG GTGTCGAATT AAAGGATGGT
ATGACTAAAC CGGCTAAAGT TGCCATTATG CTCGAACCTA ACGTTTGGCC ACGTAACCCT
CCTATAAGAG AGCGTGCCAG TATCCCAACG ACTTGGCTAG AAATTACCAT AACAGAAGGT
CGTAATAGAC AAGTTAGACG GATGACAGCA AATATAGGCT TCCCTACCCT GCGACTCATT
AGATATCGTA TTGGTAACTG GACATTAGAC AATATTAATA ATGGGGAATA TAAAGTTGAG
CAGTAA
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| Protein sequence | MNQSKGYTRH TAKKQRKVRP LDEKQIVVLF NKPFDVLCQF TDENNRRTLK DFITIPGIYA
AGRLDRDSEG LLLLTNDGKL QHQIANPVKK TEKTYWVQIE GAPSEQDLAK LRQGVELKDG
MTKPAKVAIM LEPNVWPRNP PIRERASIPT TWLEITITEG RNRQVRRMTA NIGFPTLRLI
RYRIGNWTLD NINNGEYKVE Q
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