| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2893 |
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| Symbol | clpA |
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| ID | 3520296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3025899 |
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| End bp | 3028157 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285346 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
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| Protein accession | YP_269594 |
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| Protein GI | 71279835 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.243506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAACA AAGACTTAGA AGTATCACTT AATTTAGCCT TTCGCCAAGC TAAAGAATCT
CGCCATGAAT TTATGACTGT TGAACATTTA TTGTTGGCCC TATTAGATAA TCCCTCAGCG
ATCGAAGCAC TTGGTGCTTG CGGAGCGGAT TTAACAAAAC TTCGCAAAAG TTTATTAGAC
TTTATCAGCG AAACAACACC TACGATTCCT GTAAGTGAAC ATGAGCGTGA AACTCAACCT
ACGTTAGGCT TTCAACGGGT ATTACAACGC GCTGTATTTC ATGTGCAATC ATCAGGTAAA
AATGAAGTCA GCGGCTCAAA TGTATTAGTG GCAATTTTTA GCGAACAAGA ATCACAAGCC
GCTTATATCT TGAAAAAATC TGATATTAGT CGTTTAGATA TTGTTAATTA TATTTCTCAC
GGTATTGCAA AAATTGATGA TGAACATTCC CCACATACTT TGGATGGGGA ACAGCAAAGC
GAAGAAGAAC CGCGTACCAT TGATAACTTT TCGGTAAACC TTAATGAAGA AGCGATAAAA
GGTAATATTG ATCCTTTAAT TGGTCGTGAC GATGAACTTG AACGTACTTT ACAGGTGTTG
AGTCGACGTA GAAAAAACAA TCCGCTGTTT GTTGGTGAGG CTGGTGTGGG TAAAACGGCT
ATTGCTGAAG GTTTAGCTAA TTTAATTGTC AATAAAGAAG TGCCTGAGTT TTTAGCTGAT
GCGACCATTT ATTCTCTAGA TATGGGGGCA TTACTCGCAG GTACTAAATA TAGAGGCGAT
TTTGAAAAAC GTTTTAAATC ATTATTAAAA GAGCTAGAAG CAGATAAGAA TGCTGTGTTA
TTTATTGATG AAATTCATAC TATTATAGGT GCCGGTGCGG CTTCTGGCGG TATGATGGAT
GCTTCTAACC TGCTTAAACC GTTATTGTCA GCTGGGAAAA TTCGCTGCTT AGGTTCGACG
ACATACCAAG AGTATCAAAG TGTTTTTGAA AAAGACCGAG CCTTAGCCCG TCGTTTTCAA
AAAATTGATA TTGCGGAGCC GAGTGTTGCT GATACCACTA AAATACTGCA AGGTTTAAAA
GAGAAATATG AAAGCCATCA TGGCATTCGT TATACTAATA AAGCCTTACA TGCAGCAGCT
CAGTTGTCAG CTAAATATAT TAATGAAAGA TTTCTTCCTG ATAAAGCCAT TGATGTCATT
GATGAAGCGG GTGCTAAGCA ACAACTTGTT GCACCTAATA AACGTAAGAA AGTTATTAAT
AATACCGATA TCGAAAGCAT TGTTGCAAAA ATGGCGAGGA TTCCTGAAAA GTCAGTATCA
CTTACTGAAA AAGATGGACT TAAAAATCTA GACCGAAACT TGAAACTTGT TGTGTTTGGT
CAAGATCAAG CTGTTGATGA GCTTTCGTCT GTTATTCGGT TATCTCGAGC AGGGCTAGGT
AGTGAAGAAA AACCAGTAGG CTCTTTCTTA TTTGCCGGTC CTACAGGTGT TGGTAAAACA
GAGATAACAC AACAGTTAGC TAAAATATTG GGCATAGAGT TGTTACGTTT TGATATGTCA
GAATATATGG AGAAACATGC TGTTAGTCGT CTTATTGGTG CTCCCCCTGG ATATGTAGGT
TATGAGCAGG GTGGTTTACT AACTGATGGG GTTATAAAGC ATCCTCATGC GGTCGTCTTA
TTAGATGAAA TAGAAAAAGC TCATGAAGAT GTTTATAACA TTCTATTGCA AGTGATGGAT
CACGGTACAC TAACCGATAA TAATGGTCGA AAAGCCGACT TTAGAAACAT TATTCTGGTG
TTAACAACTA ATGCAGGGGT ACAAGAAACG GTACGCCAAT CTATCGGCTT TAAACAGCAA
GATCATAGCC TCGATGCATT AAGTGAAATA AATAAAGTCT TTTCACCTGA GTTTAGAAAC
CGTTTAGACA ACATTGTTTG GTTTAATCAT TTAGACAACA TTGTTATTCA TCAAGTAGTA
GATAAATTTA TTGTCGAATT GCAGGCTCAG CTTGATGATA AAGGCGTTTC ACTTGAATTA
ACCAAGCAAG CTAAACAATG GTTAGCTGAA AATGGTTATG ATAAAGCCAT GGGAGCAAGA
CCGATGGCTC GCTTAATACA AGAGCACTTG AAGAAAACAC TAGCAAATGA GTTGCTCTTT
GGTGAATTGA CCCATGGCGG TACTGCTAAG GTCGATGTTA AAAAAGATAA ATTAGTCTTT
AATTTTGAAA ATAAGCAAGA ATTGATTACT GCGAAATAA
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| Protein sequence | MLNKDLEVSL NLAFRQAKES RHEFMTVEHL LLALLDNPSA IEALGACGAD LTKLRKSLLD
FISETTPTIP VSEHERETQP TLGFQRVLQR AVFHVQSSGK NEVSGSNVLV AIFSEQESQA
AYILKKSDIS RLDIVNYISH GIAKIDDEHS PHTLDGEQQS EEEPRTIDNF SVNLNEEAIK
GNIDPLIGRD DELERTLQVL SRRRKNNPLF VGEAGVGKTA IAEGLANLIV NKEVPEFLAD
ATIYSLDMGA LLAGTKYRGD FEKRFKSLLK ELEADKNAVL FIDEIHTIIG AGAASGGMMD
ASNLLKPLLS AGKIRCLGST TYQEYQSVFE KDRALARRFQ KIDIAEPSVA DTTKILQGLK
EKYESHHGIR YTNKALHAAA QLSAKYINER FLPDKAIDVI DEAGAKQQLV APNKRKKVIN
NTDIESIVAK MARIPEKSVS LTEKDGLKNL DRNLKLVVFG QDQAVDELSS VIRLSRAGLG
SEEKPVGSFL FAGPTGVGKT EITQQLAKIL GIELLRFDMS EYMEKHAVSR LIGAPPGYVG
YEQGGLLTDG VIKHPHAVVL LDEIEKAHED VYNILLQVMD HGTLTDNNGR KADFRNIILV
LTTNAGVQET VRQSIGFKQQ DHSLDALSEI NKVFSPEFRN RLDNIVWFNH LDNIVIHQVV
DKFIVELQAQ LDDKGVSLEL TKQAKQWLAE NGYDKAMGAR PMARLIQEHL KKTLANELLF
GELTHGGTAK VDVKKDKLVF NFENKQELIT AK
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