| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2887 |
|---|
| Symbol | uvrB |
|---|
| ID | 3521711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3020946 |
|---|
| End bp | 3022967 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637285340 |
|---|
| Product | excinuclease ABC subunit B |
|---|
| Protein accession | YP_269592 |
|---|
| Protein GI | 71281240 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.149884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAACTATTTG CTCTGAATAT ACTCCTAGTG GTGATCAACC AACAGCGATA
AAGCAACTGT TAGAAGGTAT TGAGTCGGGT TTAGCCCATC AAACGCTTTT AGGTGTAACC
GGCTCAGGTA AAACTTATAC CATTGCCAAT GTGATTGAAA AGCTTAATCG ACCTACCATG
ATGTTAGCGC CCAACAAAAC GTTGGCGGCG CAATTGTATG GTGAAATGAA GGAATTTTTC
CCAGATAATG CCGTTGAATA CTTTGTTTCA TATTATGATT ATTATCAGCC TGAAGCTTAC
GTGCCAACGA CAGATACTTT CATAGAGAAA GATGCTTCAG TTAATGAACA TATCGAGCAA
ATGCGGCTAT CGGCTACTAA GGCACTTTTA GAGCGCCGAG ACGTGATTAT TATTGCTTCT
GTGTCGGCTA TTTATGGTTT AGGTGATCCT GACTCCTATT TAAAAATGAT GTTACATATC
AGTCGAGGTG ACATTATAAA TCAACGCGAT ATTTTACGTC GTCTCGCTGA ACTACAATAT
ACTCGTAATG ATGTTGCTTT TGCGCGTGCC ACTTATCGAG TGCGCGGTGA TGTTATTGAT
ATTTTTCCTG CTGAATCTGA CCGCCTGGCT TTACGTGTAG AGCTATTTGA TGAAGAAATA
GAGCGGATAA GTCAATTTGA TCCGCTAACA GGACAAGTTG AAAGAACACT GGATCGGGTA
ACAGTATACC CAAAGACACA CTACGCTACG CCTAAAGAGA AAATCATAGC AGCAGTAGAT
AAAATTAAAA TAGAGCTGAA GCATAGGTCA CAACAACTCA AAGATAATAA TAAATTAGTC
GAGGAACAGC GCCTTACTCA ACGAACCCAG TTTGATATTG AAATGATGAC TGAACTTGGT
TATTGCTCTG GTATCGAGAA CTATTCTCGC TATTTATCAG GGAGAGAAGA GGGAGGAGCA
CCACCAACCT TATTCGATTA TTTACCTGAT GATGGTTTAC TTATTATTGA TGAATCTCAT
GTTACCGTGC CACAAATTGG CGCTATGTAT AAAGGAGATA GATCGCGTAA AGAAAACTTG
GTGGAATATG GCTTTAGACT ACCGTCCGCT TTAGATAATA GGCCAATGAA GTTTGAAGAG
TTTGAAGCGA TCTCTCCACA AACAATTTAT GTCTCGGCCA CACCAAGCAA ATTTGAATTA
GAGAAATGTG GTAGCGATAT TGCGGAACAA GTGGTTAGAC CGACAGGTTT ACTTGACCCA
GAAATCGAAG TTAGACCGGT TGAAACACAA GTTGATGATT TATTATCAGA GATAAATAAA
CGACTACCGC TTGACGAAAG GGTCTTAGCC ACAACATTAA CTAAACGTAT GGCCGAAGAT
TTAACGGATT ACTTGTATGA CCATGGCATT AAAGCGCGCT ATTTGCATTC AGATGTTGAT
ACGGTTGAAC GGGTAGAAAT TATAAGAGAC TTTAGACTAG GTAAATTTGA TGTTTTAGTG
GGTATAAATT TACTTCGTGA AGGTTTAGAT ATGCCAGAAG TATCTTTAGT GGCAATTTTA
GATGCGGATA AAGAGGGCTT TTTACGTTCC GATCGTTCTT TGATTCAAAC GATTGGCCGA
GCTGCGCGTA ATCTCAATGG TCGAGCAATA CTGTATGGAG ATAGAATTAC GGGCTCTATG
CGACGTGCTA TTGATGAAAC AGAACGACGT AGAGTGAAGC AACACCAGTA CAATTTAGAC
AACAATATTA CCCCCCAAGG CGTTGTTAGA AGAATTACCG ATGTTATGGG CGTGGGAAGT
TATAGTGATG CTAAGTCACT TGATAAAGTT GCAGAAGCTA ATACAAATTA TCATATTAAC
CAGCAGGCGG AAGAACCTCT ATTAACCACG TCACAAATTG ACACTAAAAT AGTTGAGCTT
GAAAAGCTAA TGCAGGGGCA TGCGCAGAAT TTAGAATTTG AACAAGCTGC TGCTATGCGC
GATAAGATAG CAAAATTACG AATACAGCAA CTATCTACTT AA
|
|---|
| Protein sequence | MKKLTICSEY TPSGDQPTAI KQLLEGIESG LAHQTLLGVT GSGKTYTIAN VIEKLNRPTM
MLAPNKTLAA QLYGEMKEFF PDNAVEYFVS YYDYYQPEAY VPTTDTFIEK DASVNEHIEQ
MRLSATKALL ERRDVIIIAS VSAIYGLGDP DSYLKMMLHI SRGDIINQRD ILRRLAELQY
TRNDVAFARA TYRVRGDVID IFPAESDRLA LRVELFDEEI ERISQFDPLT GQVERTLDRV
TVYPKTHYAT PKEKIIAAVD KIKIELKHRS QQLKDNNKLV EEQRLTQRTQ FDIEMMTELG
YCSGIENYSR YLSGREEGGA PPTLFDYLPD DGLLIIDESH VTVPQIGAMY KGDRSRKENL
VEYGFRLPSA LDNRPMKFEE FEAISPQTIY VSATPSKFEL EKCGSDIAEQ VVRPTGLLDP
EIEVRPVETQ VDDLLSEINK RLPLDERVLA TTLTKRMAED LTDYLYDHGI KARYLHSDVD
TVERVEIIRD FRLGKFDVLV GINLLREGLD MPEVSLVAIL DADKEGFLRS DRSLIQTIGR
AARNLNGRAI LYGDRITGSM RRAIDETERR RVKQHQYNLD NNITPQGVVR RITDVMGVGS
YSDAKSLDKV AEANTNYHIN QQAEEPLLTT SQIDTKIVEL EKLMQGHAQN LEFEQAAAMR
DKIAKLRIQQ LST
|
|---|
| |