| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2869 |
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| Symbol | |
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| ID | 3521809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3000862 |
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| End bp | 3002100 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637285322 |
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| Product | putative lipoprotein |
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| Protein accession | YP_269574 |
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| Protein GI | 71281337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.272098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATT TCTCAGCAAA ATCTGCTGGA GTCGCATTAA TTATAGGCTT CTCAGCAAGT
TTATCTGTTA GTTGCTTTGC TTTTGCCAAG TCAACGTTAT CAAGTGAATG GCTTGATCAA
CAAATCAATA AACACCCTGA TATTGTCTCA GCACGTGAGC TCATGAATGC TGAATTTTCC
AAAGCACAGG GCAGTAAGTT ACCACTTTAC AACCCCGAAC TATCTACAGG TTATGAGCGC
GAAGGTGACG GCAATAATTA CAATATTGGT ATTAGCCAAA CAATTGATTT GTGGGATAAG
CAGGCTGTTA ATGCTGCCAT TGGCGATAAA ATATTAACGG CGGCCAGTAA ACAATTCACT
TATGCGATAG CGCAAAAAAA AGCACAAGCC TTAACAGCAC TTATTAATTG GCAACTTGCC
ATGGATAAGT CATCACTTGC GTTTGAACAA GAACAACAAT TAGAGATCTT ACTTAAAATT
GTGACTAAGA GGCAGAAAGC GGGTGATCTT GGTCAAGTTG AAGCTGAGTT AACCTTCTTA
AATTTGTCGC AATTACTCAA TAAAACGGCC CAAATACAAG CACAATTAAC CCAAGCGCAA
GCTCAAGTTA ATGAGTTATT GCCTGATTGG CGTCCTGATA CGCAAGTATA TCCAGAGCAG
GGCTTGGGCG TTACAAACTT TCAAGTAGCT GAGCAGTGGT TAACGCAGCA CCCGCAAGTA
TTAGCTTCTC AAGCACTATG GCAGATGCAA AAAAGTAAAG CTCAATACGC CATGCTTGAA
ACCAAAGCCG ACCCTACCAT TGGAATAAGT GCCGGAAAAA ATGATGTCGA TAATGTCATC
GGAGTCACTT TTTCCATGCC ACTCAATATT CGTAATGATT ACCAAGCCAA TGCCAAAGCT
GAAAACCAAC AAGCTAACGC TGCCGAGGCA AGTTTTCGTT CAGTAATGCG CAAACAAAAG
TATTTAATAC AGGCAAGTAC CGCCTCTCTA ATCTCTAATA AAAAATACCT TGGCCGTTGG
CAGCAGTTAA TGAAAGGGCG CGGCGAACAC AGCGCACAGT TATTGCAAAA ACAATGGCAA
GTAGGTGATT TAAATACCTC GGATTATTTA TTGGCATTGC AACAAAGAGC GGAAGGTTTA
TACGCGGGTA TTGAATTACA AGCCCAGTTC AAAATAAGCG AAGTGCAATG GCTACTCGAT
GTAGGTCAAT TAAGTGTGGC AACCAAGCTA TTAAACTAA
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| Protein sequence | MKYFSAKSAG VALIIGFSAS LSVSCFAFAK STLSSEWLDQ QINKHPDIVS ARELMNAEFS
KAQGSKLPLY NPELSTGYER EGDGNNYNIG ISQTIDLWDK QAVNAAIGDK ILTAASKQFT
YAIAQKKAQA LTALINWQLA MDKSSLAFEQ EQQLEILLKI VTKRQKAGDL GQVEAELTFL
NLSQLLNKTA QIQAQLTQAQ AQVNELLPDW RPDTQVYPEQ GLGVTNFQVA EQWLTQHPQV
LASQALWQMQ KSKAQYAMLE TKADPTIGIS AGKNDVDNVI GVTFSMPLNI RNDYQANAKA
ENQQANAAEA SFRSVMRKQK YLIQASTASL ISNKKYLGRW QQLMKGRGEH SAQLLQKQWQ
VGDLNTSDYL LALQQRAEGL YAGIELQAQF KISEVQWLLD VGQLSVATKL LN
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