| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2823 |
|---|
| Symbol | |
|---|
| ID | 3519576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 2958694 |
|---|
| End bp | 2959413 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637285276 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_269535 |
|---|
| Protein GI | 71277937 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.346929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTAC AAAATCCAAC CAAACAAGCC GCAGTGACTA CTGCTGATAA AGTTTTTGAG
CAGCTTCAAT TTGCCATTGT TGAAGGTGAG ATGGCTGCGG GTAGTAAAAT AAGTGAGCCT
GAGCTTGCTA AGCGTTACCA AATAAGTCGT TCCACATTGC GTGAAGCGTT AAATCGTCTT
GAAAAATGTC ATTTAATAGA GCGCAAAGCA AATGTTGGCT CACGTGTAGT TGATTGCACC
ATAGAAGGTT TACTTGAGTT ATATATAACG AGAGAAGCAC TTGAAGGTAT GGCATGTCGC
CAAGCGGCAT TAAATATGAC CGATGAAGAG ATAGAACATA TGCAAGATAT GCTCACTCAA
CATGCAGGTG ATAAAGCGTT GCAAGATGGC GTAGCTTACT ACCAAGAAAA AGGTGATCTT
GATTTTCATT ATAAGGTTAT TTTAGGTAGC CATAATAAAC AATTAATCGA ATTGATTTGT
GGCCAGCTAT ATCACTTAAT TCGTATGTAT CGTTGTCAAT TTGGTATGAA TAGCCCTAGA
GCGAGTCGTG CTTTTGATGA ACATTCACGC ATAATCCAAG CAATTGCAGA TCGAGATGGA
GAATTGGCAG AAATGCTAAT GCGACGTCAC ATTGCTGCAT CACGTAAAAA TATCGAAAAC
AAAATATCAA AAGAAATCGC TCAAAAAGAG CAAAACAAAA TACAACTCAT CAAGTCTTAA
|
|---|
| Protein sequence | MLLQNPTKQA AVTTADKVFE QLQFAIVEGE MAAGSKISEP ELAKRYQISR STLREALNRL
EKCHLIERKA NVGSRVVDCT IEGLLELYIT REALEGMACR QAALNMTDEE IEHMQDMLTQ
HAGDKALQDG VAYYQEKGDL DFHYKVILGS HNKQLIELIC GQLYHLIRMY RCQFGMNSPR
ASRAFDEHSR IIQAIADRDG ELAEMLMRRH IAASRKNIEN KISKEIAQKE QNKIQLIKS
|
|---|
| |