| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2819 |
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| Symbol | prpF |
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| ID | 3521395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2952274 |
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| End bp | 2953467 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637285272 |
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| Product | AcnD-accessory protein PrpF |
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| Protein accession | YP_269531 |
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| Protein GI | 71280926 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0822115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCACG ATTCTCAAGT GCATAAACCT CAAGTGAAAA TTCCTGCTAC ATACATTCGT
GGAGGTACCT CTAAGGGCGT ATTTTTTAAT TTAACCGATT TGCCAGCAAG CTGTCAGGTT
CCAGGTAAAC CTCGCGATAA CATGTTATTG CGCGTCATTG GTAGCCCAGA TCCATACGGT
AAACAAACCG ATGGTATGGG CGGAGCAACG TCTAGTACTA GTAAAACGGT AATCTTAGCT
AAATCAGAAC AAGTGGATCA CGATGTCGAC TATCTCTTTG GCCAAGTGGC CATTGATAAA
GCGTTTGTTG ATTGGAGTGG CAATTGCGGC AACCTTACTG CAGCTGTTGG TTCTTTTGCT
ATTAGTTCAG GATTAGTGAG TGCAGACAGA ATACCTGCGA ACGGTATTTG TGAAGTGCGA
ATTTGGCAAA AGAATATCAG CAAAACGATT ATTGCCCATG TACCAATCAC TAACGGTGAG
GTACAAGAAA CTGGTGACTT TGAACTCGAT GGCGTAACTT TCCCTGCAGC TGAAGTGAAA
GTTGATTTTG TTGCACCGGT AGACCCGAGT GAGGCAATGT TCCCTACAGG TAATTTGGTT
GATGATCTTG TTGTACCTGA TATTGGCACA TTTAAAGCGA CTATGATCAT GGCAGGTATT
CCAACCATTT TCTTAAATGC AGACGAAATA GGTTATACAG GTACCGAGCT TCAAGACGCT
ATAAATAATG ATGATGAAGC CCTTGCACGT TTTGAAACCA TTCGTGCGTA TGGTGCGATA
AAAATGGGTT TAATTAGCGA TATCGAAGAA GCGAAAGCCC GTCAACATAC CCCAAAAGTT
GCTTTTGTTT CACATGCACA GGATTATACA ACGTCTAGTG GTAAAAATAT TACTGCCGGT
GAGATTGATT TACACGTACG TGCACTCTCT ATGGGTAAGT TACACCATGC CATGATGGGA
ACTGCTGCCG TAGCTATTGG TACTGCAGCA GCCATTCCTG GTACTTTGGT CAATATTGCT
GCTGGCTCGG GAGAAAGAAG CGAGGTAACT TTTGGTCACC CATCAGGCAC GCTAAAGGTT
GGCGCACAAG CTGAATGTGT TAATGATAAC TGGACGGTGA AAAAAGTAAG TATGAGCCGA
AGTGCTCGCG TACTTATGGA AGGTCAGGTA AGAGTACCTG CATTGTTTGA ATAG
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| Protein sequence | MSHDSQVHKP QVKIPATYIR GGTSKGVFFN LTDLPASCQV PGKPRDNMLL RVIGSPDPYG
KQTDGMGGAT SSTSKTVILA KSEQVDHDVD YLFGQVAIDK AFVDWSGNCG NLTAAVGSFA
ISSGLVSADR IPANGICEVR IWQKNISKTI IAHVPITNGE VQETGDFELD GVTFPAAEVK
VDFVAPVDPS EAMFPTGNLV DDLVVPDIGT FKATMIMAGI PTIFLNADEI GYTGTELQDA
INNDDEALAR FETIRAYGAI KMGLISDIEE AKARQHTPKV AFVSHAQDYT TSSGKNITAG
EIDLHVRALS MGKLHHAMMG TAAVAIGTAA AIPGTLVNIA AGSGERSEVT FGHPSGTLKV
GAQAECVNDN WTVKKVSMSR SARVLMEGQV RVPALFE
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