Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2707 |
Symbol | |
ID | 3518375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2823795 |
End bp | 2825309 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285160 |
Product | putative lipoprotein |
Protein accession | YP_269419 |
Protein GI | 71278782 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAATA ACAATAACAA ACTAATCATC TCATCAGTGT TCGCACTCTC ACTTACCGCG TGCGGCGGTG GTGGCTCTGA CACCCCAGAG GTACTACTAA CACCGGATAC CGTAGAAAAA CCAGTACCAG TGCCTATAGC AGAACCCGCG CCACTCCCCT CTGAGACTAC TATTAGATCA AGTGGAAAAG TTATTGATGG CTATGTCGTC GGCGCAACCG TTTGGTTAGA TTTTGATGGG GATGGAAAAT ATGACCAACA AACAGAACCC TCTACCGTAT CAGGTGAGTC CGGTGATTAC AGTTTTGAAT TCTCTGAAGA TCAAGCAGCA TGTGTCCCGT ATTCAACCAC TTATGTCGAC GTTCCCGTAG GCGCGATGGA TCTTGACCTC GGTGAAGTTA CTGAAGCTTA CCAAATGTCA TTCCCACCAT CCATCGAAGC AATATCTGAT AATGATATCC GCAACATTTC ACCACTCACC ACGGTTATTT GGGGACAGCT AAAACGCCAA CTAAAAGCTA GCGGTAAAGG CAATTTAACT TGTGACCAAC TTAAACAAGA TAGTGCCCTT CGCAACGAAA TAAAAAATGA AGTTGAAAAT GTGATGCTTA ACTTGGTGCA GCACTACAAC CTATCAGAAG AGCAAATATA TTCCGACTTT ATCGCCTCTA AAGATAGTGA AACGTATGAC CATGCTCAAT CAATCGTCAA AGGTCTAAAA GCAGCATATA AACACAAGAA AAAGCTTGAA AAAATTTACC CTGACGCAGC TGAAATACGC GTCACTGTGT ACCAAGATGC AGTCAGAGAT GAAGAGCTGG GATTCACAGA TGCGTGGTAT CGCGATGAAA TTATTTTCCT TGAAACAGAA GATTTTTCAG AATTTGTAAA ACTTGCTGAC GATCAATCAC TCTCTAAGGT TGATATAATC CTATCTAAGT TTCATGAAAG CGGACAACCT TGGGGCGATC AAAACGTTGG AGGATGGTTA CGTGTTCGTC AAGATATCTA TCGTAACGAT GATAACTCTT ATCGTTGTGG CAATGTAGAA CGTGTCAGTT TCGAAGAAAA CAGCGTGCTG TATGAACTAA GTAATATCGT ACCCACAGTA TCATTTGCAA CAATAGAAGA ATGCTCAAAT GATAATCTAG AAAATCCTTA TGAACGTAGC TACTCATACC GCTTCACCGA AGGAAATTCA ACTTACTCTA CTGACTTTTA CTTTAGAGAA CAAAACGCAG AGTTCACGGC TCTACCTGAT TGGATCAACA TAAAAGACAA AAGCGACATG TTAGCTGCTA CTGAGATAAT CAGCCACATG TCTTCCTTTG CCATTGGTTG GGAGCAAGAT GTGCTTGTTG ATACCGATTA CTGGCGTAAA CGCCTAGAAT ACGACAACAT TATTATTGAC AAAGATAATC AAAATAACTG GGTCAAATCA ATTAAACAAG AAGACAACAC TATCCTCTTT GAATGCAGTG TAGATGGGGT GGTTTGGGTT ACCTGTGAAG GCTAA
|
Protein sequence | MINNNNKLII SSVFALSLTA CGGGGSDTPE VLLTPDTVEK PVPVPIAEPA PLPSETTIRS SGKVIDGYVV GATVWLDFDG DGKYDQQTEP STVSGESGDY SFEFSEDQAA CVPYSTTYVD VPVGAMDLDL GEVTEAYQMS FPPSIEAISD NDIRNISPLT TVIWGQLKRQ LKASGKGNLT CDQLKQDSAL RNEIKNEVEN VMLNLVQHYN LSEEQIYSDF IASKDSETYD HAQSIVKGLK AAYKHKKKLE KIYPDAAEIR VTVYQDAVRD EELGFTDAWY RDEIIFLETE DFSEFVKLAD DQSLSKVDII LSKFHESGQP WGDQNVGGWL RVRQDIYRND DNSYRCGNVE RVSFEENSVL YELSNIVPTV SFATIEECSN DNLENPYERS YSYRFTEGNS TYSTDFYFRE QNAEFTALPD WINIKDKSDM LAATEIISHM SSFAIGWEQD VLVDTDYWRK RLEYDNIIID KDNQNNWVKS IKQEDNTILF ECSVDGVVWV TCEG
|
| |