| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2703 |
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| Symbol | |
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| ID | 3522953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2819256 |
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| End bp | 2820440 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637285156 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_269416 |
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| Protein GI | 71282478 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA ATTTATGTAG TCTTTTATTA TGTATTCCAC TTTTACTTGC TTGTCAAAGT
AATCAAAACC TCCATGTTAA CCAAGCTAGC TCGCCAACAG ACTTATACTT AGATTATCAA
TACCTCTCTT TAAAACCCAT TCATATCGAA ACAGAACAAG AGATATTTCA GCTCGACGAT
GGCATGCGTG CCATGGTTCA GGATAAATTA GGTAATAACC TAACCACCCA GCAAAAAGCG
CGAGTATTAC TTAATCACCT GTTTAATGAA GAGAGTATCG CGTTAAGTTA CGACGGTAAT
GCCAATGTTA CCGCACGGCA GGCCTACCAT AATAAATTAG CTAATTGTAT GTCACTCACC
ATCTTAGCAT ATGCTTTAGC TGATGAAGCG GGCATGAACA TTAGCTTTCA AGATGTTGAT
GTTCCTGAAT ATTGGGTACG GAATGGCCAA TATAGTTTAT TAACAGGTCA TGTGAATTTA
CTGGTAGAAG AAAGTGATGA AGTTAATAAG CGCGTCGTTT GGGGAGCAAG AAAAATTCGA
ATCGATTTTG ACCCTTTTGT TGCAAAGAAA AGCTTTCCCT CTCACACTAT TGAAAAGCAT
ACATTACTTG CTATGTTTTA TAATAATAAA GGGGCAGAGG AGATGCTAAA TAAAAACTAC
CCGCTGGCCT ACCAATATCT TAAAAAAGCG ACCATTACCG ATAGTGATTT TTCTTCCGCT
TGGGGAAATT TAGGGGTTTT ATATAAACTC TCTGGTCATT ACGATATGGC GGAAAGTGCT
TATAGTCATG CTATTAGCCT ACAAGGTGAT AATCTTACCT CACTCGGTAA TCTAGCTTTG
TTGTTTACCA TACAAGGACG ACCTGAGGAA GCACAAAAAA TAGACGCATT TATACACAAA
GCACGTGTTA AAAACCCTTA CTATCATGCA TTACTTGGTA ATGAAGCTTT TTTTAAGCAG
TCCTATCACC AAGCGATAAA GCATTACAAG AAAGCTATTC AACTTGATGA TGAACAACAT
GAATTTTACT TTGGCTTAGC TAAAGCTTAT TACAAGCAAG ATAAATTAGC GTTATCTAAA
TATGCTATGA AAAAAGCGGT GGCGCTAACA AAAACGAAAG ATACGCAGAA GCAATATATC
GCGAAACTTA ATTTCCTTAA ATACCATGAG ACAACTAATC ATTGA
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| Protein sequence | MKSNLCSLLL CIPLLLACQS NQNLHVNQAS SPTDLYLDYQ YLSLKPIHIE TEQEIFQLDD
GMRAMVQDKL GNNLTTQQKA RVLLNHLFNE ESIALSYDGN ANVTARQAYH NKLANCMSLT
ILAYALADEA GMNISFQDVD VPEYWVRNGQ YSLLTGHVNL LVEESDEVNK RVVWGARKIR
IDFDPFVAKK SFPSHTIEKH TLLAMFYNNK GAEEMLNKNY PLAYQYLKKA TITDSDFSSA
WGNLGVLYKL SGHYDMAESA YSHAISLQGD NLTSLGNLAL LFTIQGRPEE AQKIDAFIHK
ARVKNPYYHA LLGNEAFFKQ SYHQAIKHYK KAIQLDDEQH EFYFGLAKAY YKQDKLALSK
YAMKKAVALT KTKDTQKQYI AKLNFLKYHE TTNH
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