Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2601 |
Symbol | |
ID | 3522385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2704653 |
End bp | 2705213 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637285055 |
Product | anti-oxidant AhpCTSA family protein |
Protein accession | YP_269316 |
Protein GI | 71281913 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.183821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGTTA ACATCAATTT TACGAAAATA AACAGTATGA AAAAATCTAT CCTAGTCATT TGTAGCTTAG TAAGTCTCGT TGGATTTTCC GCGTTAGCAA CCGATTTAAA AGTGGGCGAC ATTGCACCAA ATTTTAAACT ACAAGCAACG ACTGGTGATT ATTACCAATT AAGTGATTAC AAAGGCAAAC AAGCAGTGGT TTTAGCTTGG TATCCAATGG CAAATACCCG TGGTTGTACT ATTGAATGTA AATCGCTGAC AGAACAAGGA CACCTAATTC GAGAGTTTGA TGTTAGTTAC GTTATGGCTA GTGTCGACCC TATTGATGAT AACAGAGACT TTGCTGAGAA AACGGGTGCT GACTTCCCCA TGCTAAGTGA TCCTACTAAA ACAGCGGCGA AAGCGTATCA AGTGCTTAAT ATGTTCAAAG TTGCCAGTCG CGTCACTTTC TATATCTCTA AAGAAGGTAA AATAGTCAAA ATTGATGATA ATATTTCACC AAAATCTGCT GCTCAAGATA TGGCTTATAA TTTGGCCGCT TTAGGTATTG CTAAGCAATA A
|
Protein sequence | MKVNINFTKI NSMKKSILVI CSLVSLVGFS ALATDLKVGD IAPNFKLQAT TGDYYQLSDY KGKQAVVLAW YPMANTRGCT IECKSLTEQG HLIREFDVSY VMASVDPIDD NRDFAEKTGA DFPMLSDPTK TAAKAYQVLN MFKVASRVTF YISKEGKIVK IDDNISPKSA AQDMAYNLAA LGIAKQ
|
| |