| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2521 |
|---|
| Symbol | |
|---|
| ID | 3522427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2624746 |
|---|
| End bp | 2625657 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637284976 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_269237 |
|---|
| Protein GI | 71281955 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.26667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTTC TCATGAAGAG AAAGATAGAC TTATTAAAAG CGATGAGTAC CTTTATTGTT
GTTATTGATA AAGGAAGTTT TAGCGCGGCA TCAAGAGAAC TCAATATAGT GACTTCTGCT
ATCAGTCGAC AGGTCTCAGA TTTAGAAGAT CACTTTGCGT GTCAATTGCT TTATAGAAGC
ACCAGAGCCA TGAGTCTCAC CGCCGAGGGT AAACAGTACC TTGAACAATT TAGAAATATA
ATCGGTAGTG TTGAACAATT AGAGAATAAA TCAGACGACT TGAATCGAGT ATTATCAGGA
CACTTAACCA TTTCAGCCCC TAGTGGCTCT GCATCGTTAG GCTTTCTAAA ATCAGCCAGT
GATTTTATGA AACTACATCC AAAGGTAAAA ATATCTTGGT TATTCGTCAA TCGATTCGTC
AATATGGTGC AAGAGGGGAT AGATTTATCT ATTCGGGTTG GTGAGTTACC TGATTCTAAT
TTTATTGCTC GACGATACGG TTCTACCCAG ATTAACTTTG TCGCTAGTGA GCAGTACATC
AACCAACATG GTAAACCTAA ACACCCAAAA GAGTTGTCCA AGCATCAGTG TCTAGTAGAT
AGCTCTAATC GCTTTCCTTT ACGTTGGCGT TATCAAGAAG AAGGCAAAGA GCATCATGCT
GCTATTGATT CTTTTGCTGA AGCGAATGAT GGCGACATAG TTGCAAAATT AGCAACAGAA
GGACTAGGCA TCGCTTATCT ACCGACGTTT CTGACTCAAC AGTATTTAGA TAATGGAACA
TTAATACCAA TATTAACTGA ATTTCAATTT GACCGGATTC CTGTTTCATT GGTTTATCCT
GCTAAGTTAA TGATAAATCC GTTGATGAAA TCTCTAGTAG GTTACTTATT AGAAGACTTG
AAGAACGATT AA
|
|---|
| Protein sequence | MIVLMKRKID LLKAMSTFIV VIDKGSFSAA SRELNIVTSA ISRQVSDLED HFACQLLYRS
TRAMSLTAEG KQYLEQFRNI IGSVEQLENK SDDLNRVLSG HLTISAPSGS ASLGFLKSAS
DFMKLHPKVK ISWLFVNRFV NMVQEGIDLS IRVGELPDSN FIARRYGSTQ INFVASEQYI
NQHGKPKHPK ELSKHQCLVD SSNRFPLRWR YQEEGKEHHA AIDSFAEAND GDIVAKLATE
GLGIAYLPTF LTQQYLDNGT LIPILTEFQF DRIPVSLVYP AKLMINPLMK SLVGYLLEDL
KND
|
|---|
| |