| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2427 |
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| Symbol | |
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| ID | 3520232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2538540 |
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| End bp | 2540204 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284882 |
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| Product | ABC transporter protein |
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| Protein accession | YP_269143 |
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| Protein GI | 71279771 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.152948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTA CTTTTAACTT GTTGAATAAT ACCACCGCGT TAACACAACT CTCGCTCTCA
TCAGTATTTA TCAATTTATT ATCGTTAGCG CTGCCTTTCA CCATGCTACA AATTTACGAT
AGAATTTTAC CTAACCAGAG TTACGGTACT GCAACCGTCC TGGTTATTGG GGTCGCCATA
GCCATATTAC TTGAGCTGTT TCTTCGGTAC GCAAGAAGCT GGGTGCTTGC CTCTTCTGCG
GCTAACTTTG AATTACAAAC CACGATAAAT GTTGTTAATA AGGTAATGGA AGCCGATCAC
CAACCTCTAG ATAAAATGGG TAGTGGAAGC TTATTCAATA GCTTGTCGGG TATCGCAACA
ATGAGAGATT TATATTCAGG GCAAGCTGCC GTTGCGATGA TGGACTTTCC CTTTGTTCTA
ATTTTTCTCG GTTTAGTAGC TTATATTGGC GGACCTTTAG TTTTTATCCC CATCGTAGTT
TGGTTTGTTG TTATTTCGTT GGTGTTACTG ATAAGTAAAA ACCTATCAAA AGTAACGGAT
GAATTATCGG CAACAGACAG CCAGCGTTCA TCAATCTTAC TTCATGTATT ATCAGGCCTT
ACGACAGTAA AAGCGTTAGC ACTAGAGCAA CGTTTATCGC GAGAATACCG TGAATTAAAT
TTTAAACGAT TAGCAGAGCA AGAGAAAATA GATTGGTTAT CAGCCAAACT GCAAGAATTA
ATTCAAGGTG CTTCCCAGGC AACAACGTTA ATCTTAGTGT TACTGGGTTG TTTATCAGTA
TTAAATGGTG ATTTAACAAC GGGTGGTTTA GCAGCCTGTT CAATTTTAGC GGGTAGGGCT
GTTGCTCCCC TAAGTGCTAT TGTCAGTCTT CGTTCTCGAA TCGCGACAGC AAAAGTGGCC
ATGGCTAATG TGGATGAATT ATTGTCACTA CCCAAAGAAG CATTTACTAG TGCCAAAATT
TATAACGAAA AACTGCCATT AGGTCCTATA CAGTTTAAGG CGGTTAACTT TGAACACATG
GGCGCAAAAC TAACTCAACT ATCATTAACT ATCCAAACCG GTCAGCTTTG TACTATTCAA
TCTAATCCTC TAACGCATGC AAGCGCAGTA CTGCAAACGT TAGGCTTATT TAAACATGTA
AATGCTGGCA GTATTTCTAT TGATGGTGTG GAGATAGCCG AACATGCAGC AAATGAATTT
CGTCAATCGG TTTTGTATGT TCCACCTTGG CCAACGTTAT TTGCAGGCAG CTTATTAGAA
AATATGACCA TGTTTCAACC GCAATACGAA AGTTTAGCAA TGCAATACGC TAACGTTTTA
GGGTTAACAA ATACCATCGC ACAATTACCT GCAGGCTATG CAACACAGGT AACAGAAGAC
AACAATAAGA TGATTGGTAA AGGCGCTATA AAGTTAATGG CGATAATACG CGCCATGGTA
CAAAGTCCGT CTATTCTGTT GTTGGATGAA CCCATGATTG CACTTGATTC AGACTCCCAA
GCAAGGTTGT TAACCTTACT TCGATCACTT AAAGGTGAGA TGACCATGTT AGCGGTTTCC
TACTTTGATG AATTATCGGA AATTAGCGAT GTCACAATGA CCCTGACAAA TGAGGAAGGG
GAAAATACGG TATTGTCTGA AAAAAGAGGG TCAACTCATG AATAA
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| Protein sequence | MKSTFNLLNN TTALTQLSLS SVFINLLSLA LPFTMLQIYD RILPNQSYGT ATVLVIGVAI
AILLELFLRY ARSWVLASSA ANFELQTTIN VVNKVMEADH QPLDKMGSGS LFNSLSGIAT
MRDLYSGQAA VAMMDFPFVL IFLGLVAYIG GPLVFIPIVV WFVVISLVLL ISKNLSKVTD
ELSATDSQRS SILLHVLSGL TTVKALALEQ RLSREYRELN FKRLAEQEKI DWLSAKLQEL
IQGASQATTL ILVLLGCLSV LNGDLTTGGL AACSILAGRA VAPLSAIVSL RSRIATAKVA
MANVDELLSL PKEAFTSAKI YNEKLPLGPI QFKAVNFEHM GAKLTQLSLT IQTGQLCTIQ
SNPLTHASAV LQTLGLFKHV NAGSISIDGV EIAEHAANEF RQSVLYVPPW PTLFAGSLLE
NMTMFQPQYE SLAMQYANVL GLTNTIAQLP AGYATQVTED NNKMIGKGAI KLMAIIRAMV
QSPSILLLDE PMIALDSDSQ ARLLTLLRSL KGEMTMLAVS YFDELSEISD VTMTLTNEEG
ENTVLSEKRG STHE
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