Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2413 |
Symbol | |
ID | 3519082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2524573 |
End bp | 2525532 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637284868 |
Product | SecC motif-containing protein |
Protein accession | YP_269129 |
Protein GI | 71278319 |
COG category | [R] General function prediction only |
COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00422033 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAG AACAAATTTT ATTGGCAATA AGTAATCCAA ATGACAATGA ATTAACTATT GCAGGTCTAG AGGCTGCGAA AGTAAATTGG TCAGTATTTT ATCCTGAGTT AGAACGGCTA ATGGATCAAT TTATCGCAGA TGATACATCA TTAACAGATG AACAAGAGGC TATTGTATTT TTCGGTACTT TATTATTAGC GGAATTAAAG TATTCTCCAG CGTTAGCAAA GTGTTTACAG TTATTTGCCC GCAGTGACAC ATATTTAACA CCCATTGAAG CAATATTTGG TGATGCTCTC ACTGAATTAA CGGCAACCTT ATTTTTTAAT GTGGCCGATG GTAGTACACA AACATTGTCT GATTATATTG TTGATGGCCA TCAAGCTATG TATTGTAAAG CATCTGCTAT TGAAGCTGTA TTTGCTCAAT ACGAAGTAGG GGTTATTGAT AAGACTGAAT TAGTTGAACA TGTAACGCGA TGGTTAGCTG CATTTTTGGC TCTTCCGAGT TCAAATAATA GCTTTTTAAT TAGTGTATTA GCAGACTCTT GCATTAAATA TCAACTTGAT GACTTTAAAC CTCAGTTTAT TGACTTATGT GACAACGATT TATTTGATGA AGATCGCTTC AAACAATGTG AAGTAAAAGC ATGGGATAAG GCTAATGCAG CTAAGCTGAT TGAGTCTGGC AACATTCAAA CGAAATTTAA TGTTGTTGAT ACCTTAAATG CTTGGATTGT TGATGATTCG AACAATGAAG TAGCTGACAA TATGTCAAAC GAAGACTCTG ATGCATTTGA ATCGTTAATG GGTGAAGACG GTTTATTGGC TGATATCCTA TACGACGAAA ATACAATTTT AGAGAACAGT GTGCCGGTTA GTTCATTACC TACAGCTGGG CGCAATGATC CTTGTCCTTG TGGCAGTGGA AAGAAATATA AGAAGTGTTG TTTAAGGTAG
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Protein sequence | MNLEQILLAI SNPNDNELTI AGLEAAKVNW SVFYPELERL MDQFIADDTS LTDEQEAIVF FGTLLLAELK YSPALAKCLQ LFARSDTYLT PIEAIFGDAL TELTATLFFN VADGSTQTLS DYIVDGHQAM YCKASAIEAV FAQYEVGVID KTELVEHVTR WLAAFLALPS SNNSFLISVL ADSCIKYQLD DFKPQFIDLC DNDLFDEDRF KQCEVKAWDK ANAAKLIESG NIQTKFNVVD TLNAWIVDDS NNEVADNMSN EDSDAFESLM GEDGLLADIL YDENTILENS VPVSSLPTAG RNDPCPCGSG KKYKKCCLR
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