Gene CPS_2284 details

Gene Information

• Locus tag: CPS_2284
• Symbol: eda
• ID: 3519097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2384478
• End bp: 2385125
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637284741
• Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
• Protein accession: YP_269004
• Protein GI: 71278295
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase
• TIGRFAM ID: [TIGR01182] Entner-Doudoroff aldolase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.143223
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGTAT CAAAAAATTG GCAAATTATG CCAAAGGACC TTTTCAACAT GGGGCCTATT 
GTTCCTGTAT TAGTAATCAA CAACGTTGAA GAGGCGTTAC CGATTGCGGA AGCATTATTG 
ACTGCAGGCA TTAAAGTATT AGAAGTAACT TTACGCACGT CGGCAGCACT TGAAGTGATC 
AGTGCTATTG CAAAGGAATT ACCAGAAGCC ATTGTGGGCT CAGGTACAGT TACCAACCGT 
CAGCAATTGC AGCAGTCTTA TGATGCGGGT GCTAAATTTG CTATCAGCCC AGGTTTAACA 
AAAGATTTAT TACAAGCGGG TAATGAGGGT AAAATTGCGT TAATTCCAGG TATATCTTCT 
ATTTCTGAGC TTATGGACGG TGCAGATTAT GGTTATGACC ATTTGAAATT TTTCCCTGCA 
GAAGCTTCGG GTGGCGTTAA TGCTATTAAA TCAATTGGTG GGCCTTTCCC TGATATTCGT 
TTTTGCCCTA CAGGCGGTAT AAACCTAGGT AATGTGCGTG ATTATTTGGC TTTACCGAAT 
GTTGTTTGTT GTGGTGGTTC ATGGTTAGTT TCAAATAGTA TTGTAGAAAA CAAAAATTGG 
TCTGAAATCA CCAAATTAGC TAACCAAGCA TTAGCACATG TAAAATAG 

 

Protein sequence

MTVSKNWQIM PKDLFNMGPI VPVLVINNVE EALPIAEALL TAGIKVLEVT LRTSAALEVI 
SAIAKELPEA IVGSGTVTNR QQLQQSYDAG AKFAISPGLT KDLLQAGNEG KIALIPGISS 
ISELMDGADY GYDHLKFFPA EASGGVNAIK SIGGPFPDIR FCPTGGINLG NVRDYLALPN 
VVCCGGSWLV SNSIVENKNW SEITKLANQA LAHVK