Gene CPS_2253 details

Gene Information

• Locus tag: CPS_2253
• ID: 3521350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2352441
• End bp: 2353175
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637284710
• Product: hypothetical protein
• Protein accession: YP_268978
• Protein GI: 71280881
• COG category: [S] Function unknown
• COG ID: [COG3821] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.422249
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCTTTCT CTCTAATCGA TATTTTAGCT TTATCTGTTT TTATTGTTGC TTGGTATGGC 
TATACCGTAT TTGCACGCAG AAAAGCGAAG ACAACTGATT GCATTGCACG CTCATTACAT 
CAGCATAGAA TTCATTGGAT GTATGAGGTT ATTTCGCGTG AAGTGAGGGT TTCAGAAGCC 
GCTTTACTCG CCAACTTAGA ACGTAACATT GCTTTTTTTG CTTCGAGCAC CTTGCTAATT 
CTGGCTGGTA TTTTTACCTT GTTTGCAAAA GTAGAAACGT TAGAGATAGT TATTTCATCA 
TTACCTTTTG CGGCTGAGGT AAATCACTTA GCGATACAGT TAAAACTCAG CTTATTAGCT 
TTTATTTTTG TACTTTCTTT TTTCCAATTT ACGTGGTCGA TGCGCCAATA CGGGTTTTTG 
AATGTAATGA TAGGAGCCAC GCCTTTTGAT CTTTCAGGCA CAAATGAGAA TTTAACGGCG 
TATGCGAAAC AAATGGCTAT TGTTCAAGAT CAAGCTGCTC ACTCTTATAA CTACGGACTA 
AGATCTTATT ACTTTGCTTT AGCTGCTATG TGTTGGTTTT TCCATCCCTT TTTATTGATA 
TTTATGAGCT TGTGGGTTGT TTATACTTTA TATACACGAG AGTTTAATTC TAAGGCTGTT 
AAAGCAATTA CGGCCGCGCA GAGTTTGTTA CATCAAGAAC GCCAGTTAAA AAATGAGAAA 
ACGCCGAGTG CCTAA 

 

Protein sequence

MPFSLIDILA LSVFIVAWYG YTVFARRKAK TTDCIARSLH QHRIHWMYEV ISREVRVSEA 
ALLANLERNI AFFASSTLLI LAGIFTLFAK VETLEIVISS LPFAAEVNHL AIQLKLSLLA 
FIFVLSFFQF TWSMRQYGFL NVMIGATPFD LSGTNENLTA YAKQMAIVQD QAAHSYNYGL 
RSYYFALAAM CWFFHPFLLI FMSLWVVYTL YTREFNSKAV KAITAAQSLL HQERQLKNEK 
TPSA