Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2232 |
Symbol | |
ID | 3519958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2332771 |
End bp | 2333502 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637284689 |
Product | hypothetical protein |
Protein accession | YP_268957 |
Protein GI | 71279499 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.91334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA ACCTTTATTT CATTATATTA TTAGCTAGTT TTTCGAGTAT AGCAGACAAT AAAATAACCT ACTTTATTGC AGATAAATCT TCATCGCCTA TTCAAATATC GACTAAAAAT AGCGAACAGG TAGGCATAGT TACTGATGTA ATTAATGCGA TAGAAAAACA AAACATTCAC TTTTCCCATA GTATTTTGCC TTTCAAACGT ATGATGAAGT ACATGAAAAA TCCAAAGGTT AAATGGATAA CCTATGGCTC TGCTGCTTGG CCAGGGCTAC AATCTCTATC ACTGTCTAAA ACGCCTATTA TGACAGTAAA ACACAGTTTT TTGACCTTAA AACCTAATAA ATACAATGAA ATCAGCGATC TATTTGGAAA GAGCCTAGTG TTAATTCGCG GTTTTAATTA CCCTGGTTTG GCAGCTTATA TTGAGCAAGA CAAGTTTGAT ATTATCTATG TGAAAGACCA TGAAGCAGCG ATAAAAGTCA TCGCTATGGG CAGAGCAGTT GCTTTTCCGG AAATGAATAT AAGACTAAAT TATCACCTTA AAAACATGAA ATTACCTCGT GATAATTTTA AATTTCACTA CATTGGCAAT ATTATTGCTG ATTATGATAT TAACTTATGT TTTTCTCTTA ATTTTCCCGA ACTTTTAAAG GTAAAAATAG AGGGGATTTT AGTGGAAATG AAAAACGATG GCAGATTAGA AAATATAATT AACGCCTATT AG
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Protein sequence | MKINLYFIIL LASFSSIADN KITYFIADKS SSPIQISTKN SEQVGIVTDV INAIEKQNIH FSHSILPFKR MMKYMKNPKV KWITYGSAAW PGLQSLSLSK TPIMTVKHSF LTLKPNKYNE ISDLFGKSLV LIRGFNYPGL AAYIEQDKFD IIYVKDHEAA IKVIAMGRAV AFPEMNIRLN YHLKNMKLPR DNFKFHYIGN IIADYDINLC FSLNFPELLK VKIEGILVEM KNDGRLENII NAY
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