Gene CPS_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_2232 
Symbol 
ID3519958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp2332771 
End bp2333502 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content32% 
IMG OID637284689 
Producthypothetical protein 
Protein accessionYP_268957 
Protein GI71279499 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.91334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA ACCTTTATTT CATTATATTA TTAGCTAGTT TTTCGAGTAT AGCAGACAAT 
AAAATAACCT ACTTTATTGC AGATAAATCT TCATCGCCTA TTCAAATATC GACTAAAAAT
AGCGAACAGG TAGGCATAGT TACTGATGTA ATTAATGCGA TAGAAAAACA AAACATTCAC
TTTTCCCATA GTATTTTGCC TTTCAAACGT ATGATGAAGT ACATGAAAAA TCCAAAGGTT
AAATGGATAA CCTATGGCTC TGCTGCTTGG CCAGGGCTAC AATCTCTATC ACTGTCTAAA
ACGCCTATTA TGACAGTAAA ACACAGTTTT TTGACCTTAA AACCTAATAA ATACAATGAA
ATCAGCGATC TATTTGGAAA GAGCCTAGTG TTAATTCGCG GTTTTAATTA CCCTGGTTTG
GCAGCTTATA TTGAGCAAGA CAAGTTTGAT ATTATCTATG TGAAAGACCA TGAAGCAGCG
ATAAAAGTCA TCGCTATGGG CAGAGCAGTT GCTTTTCCGG AAATGAATAT AAGACTAAAT
TATCACCTTA AAAACATGAA ATTACCTCGT GATAATTTTA AATTTCACTA CATTGGCAAT
ATTATTGCTG ATTATGATAT TAACTTATGT TTTTCTCTTA ATTTTCCCGA ACTTTTAAAG
GTAAAAATAG AGGGGATTTT AGTGGAAATG AAAAACGATG GCAGATTAGA AAATATAATT
AACGCCTATT AG
 
Protein sequence
MKINLYFIIL LASFSSIADN KITYFIADKS SSPIQISTKN SEQVGIVTDV INAIEKQNIH 
FSHSILPFKR MMKYMKNPKV KWITYGSAAW PGLQSLSLSK TPIMTVKHSF LTLKPNKYNE
ISDLFGKSLV LIRGFNYPGL AAYIEQDKFD IIYVKDHEAA IKVIAMGRAV AFPEMNIRLN
YHLKNMKLPR DNFKFHYIGN IIADYDINLC FSLNFPELLK VKIEGILVEM KNDGRLENII
NAY