| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2220 |
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| Symbol | sucB |
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| ID | 3522816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2322493 |
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| End bp | 2323968 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284677 |
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| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_268945 |
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| Protein GI | 71282343 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.412849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCG AAATCAAAGT TCCGGTATTA CCTGAATCAG TTGCTGATGC AACAGTAGCA
ACTTGGCATG TACAAGTTGG TGAAAAATTT ACTCGTGATC AAGTACTTGT AGATATTGAA
ACGGACAAAG TAGTATTAGA AGTTCCTGCA ACTTGCGACG GTGTTATGAC CGATATTAGC
CAAGCTGACG GTGCTACTGT ATTAGGCGAC CAAGTGATTG GTAGCTTTTC AGAAGGCAGT
GAAGCTGCTG CACCTGCACC CGTTGCAGCA GCAAGCGCTC CAGCGGCATC AGGAGCTGTT
AAAGTAATCG ATATCGTTGT ACCTGTATTA CCTGAATCAG TTGCCGATGC AACTGTTGCC
ACATGGCATG TAGCTGAAGG TGATACTGTA TCAGTTGACC AAAACTTAGT TGATATTGAA
ACAGATAAAG TAGTACTAGA AGTTGTTGCT CAAGATAATG GCGTAATTGG TAAAATTATC
CATGTTGAAG GCGATACTGT TTTAGGCGCT CAAAAAATTG GCGAACTTAA TGCCGGCGCA
ACTGCAGGTT CTGCTGCTAC CGCTGCACCA ATTGAAGATG CAGTAAGTTC AGATGATCTT
GCTAGCCCTT CAGTACGTCG TTTAATGACT GAGAAAGGCT TAACGGCTGC CACCGTTGTT
GGTACTGGTA AAGGTGGACG TATTTCAAAA GAAGACGTTG AAGCCGCTGC TAACAAACCT
GCTGCTGCAC CAAAAGCAGT AGCACCGGTA GCTGCACCAG TACAAGAACT TGGCGAACGT
ACACAAAAAC GTGTGCCAAT GACGCGTTTA CGTAAAACGA TTGCAACACG TTTATTAGAA
GCTAAAAATT CTACTGCGAT GTTAACTACG TTTAACGAAG TTAACATGAA GCCAATTATG
GATTTACGTA AGCAATATAA AGACTTGTTT GAAAAAACTC ATGACACTCG TCTTGGTTTT
ATGTCTTTTT ACGTGAAAGC GGTAACTGAA GCATTAAAAC GATTCCCAGC AGTAAATGCC
TCAATTGACG GTGATGACAT TGTTTATCAT AACTTCTTTG ATATCTCTAT CGCTGTATCT
ACGCCACGTG GTTTAGTAAC ACCAGTATTA CGCGATTCTG ATCAACTAAG TATGGCTGGC
ATTGAGAATG GAATTCGTGA GTTAGCTATT AAAGGTCGTG ACGGTAAATT GTCTATGGCT
GATATGACTG GTGGTAACTT CACTATCACA AACGGTGGTG TATTTGGTTC ACTATTATCA
ACACCTATTC TTAACTTACC TCAAGCAGCG ATTTTAGGTA TGCATAAAAT ACAAGACCGC
CCTATGGCAG TTGACGGTAA AGTAGAAATT TTACCTATGA TGTATTTAGC ATTATCTTAT
GATCACCGCT TAATTGACGG TAAAGAATCT GTTGGTTTCT TAGTAACAAT CAAAGAATTG
TTAGAAGATC CAACACGTCT TCTTTTAGAC GTATAA
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| Protein sequence | MTTEIKVPVL PESVADATVA TWHVQVGEKF TRDQVLVDIE TDKVVLEVPA TCDGVMTDIS
QADGATVLGD QVIGSFSEGS EAAAPAPVAA ASAPAASGAV KVIDIVVPVL PESVADATVA
TWHVAEGDTV SVDQNLVDIE TDKVVLEVVA QDNGVIGKII HVEGDTVLGA QKIGELNAGA
TAGSAATAAP IEDAVSSDDL ASPSVRRLMT EKGLTAATVV GTGKGGRISK EDVEAAANKP
AAAPKAVAPV AAPVQELGER TQKRVPMTRL RKTIATRLLE AKNSTAMLTT FNEVNMKPIM
DLRKQYKDLF EKTHDTRLGF MSFYVKAVTE ALKRFPAVNA SIDGDDIVYH NFFDISIAVS
TPRGLVTPVL RDSDQLSMAG IENGIRELAI KGRDGKLSMA DMTGGNFTIT NGGVFGSLLS
TPILNLPQAA ILGMHKIQDR PMAVDGKVEI LPMMYLALSY DHRLIDGKES VGFLVTIKEL
LEDPTRLLLD V
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