| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2148 |
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| Symbol | |
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| ID | 3523293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2250138 |
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| End bp | 2250758 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284605 |
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| Product | rhomboid family membrane protein |
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| Protein accession | YP_268873 |
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| Protein GI | 71278935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTAA CATTTAAAAA TCTTCCTCTA AAAAAACAAC ACAGCATGCT CGTTACGATC
ATCGCTATCC TCGCTATTCT CGCCTATTTT TTTAATGATG CGGTTAGTGA GCTTTTCGTT
TATCAATATC AATTAATTAG CCAAGGTGAG TTATGGCGTA CATTCACTGG ACACTTTTTT
CACACCAATG GGTTTCATCT ATTATTAAAT TTAGCCGCAT TAGCCCTTCT GTGGGCATTG
CATGGTCATT TTTATAATGT AAAAAGCTAC AGTTTACTCT TTATCACATC AGCCTTGACC
TGCAGTGCCG GTATGTATTT TTTCTCTCCT GAAATTCGTC AATATGTTGG TCTTTCAGGC
GTTTTACACG GAATTTTCGT TTTTGGCGCC ATCATGGACA TTCGTCATAA AGATAAAACT
GGTTACTTAT TATTTGTCGG AGTATGGCTA AAAATAGCAC ATGAACAATT TTACGGAGCA
AGCGAGCAAG TATCGTCGCT AATTGATGCC AATGTAGCAG TCGATGCACA TTTATGGGGA
GCTGTAGGTG GATTGCTCTT TAGCAGTTGT TATGTGTTGA TGACTAAAAA GACAATTTCA
TCATATAATA ATGAGCGCTA A
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| Protein sequence | MTLTFKNLPL KKQHSMLVTI IAILAILAYF FNDAVSELFV YQYQLISQGE LWRTFTGHFF
HTNGFHLLLN LAALALLWAL HGHFYNVKSY SLLFITSALT CSAGMYFFSP EIRQYVGLSG
VLHGIFVFGA IMDIRHKDKT GYLLFVGVWL KIAHEQFYGA SEQVSSLIDA NVAVDAHLWG
AVGGLLFSSC YVLMTKKTIS SYNNER
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