| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2118 |
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| Symbol | |
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| ID | 3520392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2206981 |
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| End bp | 2208237 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284576 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_268844 |
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| Protein GI | 71279929 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATATCG CCGTTAAAAA ACAAAAGAAA ACCTTACTTA AAAGAGTGTG GCCGTTGGCT
CTAGTCATAG CCATTCTCGC TATAGCCTTA AACTATAGTG CCTTTTTGCT ACAAGCAGAC
TACGTTATTG ATGATGATAC CTTGGTATAT GGCGAAGTTA AGCAGGGACC GTTCTCTATT
TCAGTTCGAG GTGCTGGTTT ACTGGTGCCA GATAAAATTA AATGGTTAGC AGCAAGTGTT
GACGGCCATG TTGAACGTGT TGTTGTAAAA CCAGGGAAAT CGGTGAAAAA AGGAGAGCTA
ATTATTGAGC TTAGTAATCC AAGATTAAAA CAATTGCAGG AAGAAACTAA GTGGGAGCTT
GAAGCTATTA TTGCAGAAAG CAAAGCGAGT CAGGCTGAGC AAAAGTCGGG ATTACTTTTT
CAAAAAGCAC GCATGCTTGA TGCCAAGCTA AACTATCAGA GTAGTAAGTT AAAGCTCGAT
GCCCAACGCG AGTTATTTAA CAATAAAACC GGCGCGGTTT CAAAAATTGA TTATGAAAAA
ACTAAGTTAG AAACCCAACA GTTTAATCAA CGCTGGAAAA TTCAAGAAGA AGTGCTGGTT
AGCATGACCG ACAATATTGT TGTTCAAGAC AATGCCCATA ATTCACGTAT CAATAAAATG
CGCAAAACAC TTGAGCGAGC TGAACAACAG GTTAAAGACC TGATGATTTA TGCCAGTCTA
GATAGTGTTG TTCAAGATGT CTCTGTTGAA CCAGGGCAGC GCGTAAATAT GGGCAGCAAT
TTAGCTAAAC TTGCTCAACA AGACTCACTT ATTGCCGAAT TACAAGTTGC AGAACTATTA
ATTGGCGAAG TCAGTATCGG CCAGCTAGTC ACTATTGATA CACGTAATAA CACAGTAAGT
GGCATTGTTG CTCGCGTAGA CCCCGCCGTT GTTAATGGCA ATGTACAAGT AGATGTAACC
TTCACAGAAG CATTACCCAG TGACGCAAGA CCCGATTTGA GTGTCGATGG TGAAATCATG
ATCACAGATA TTGCCGATAC CTTGTATGTG AGTCGTCCTA TCTTTTCGCA AAGGCAATCT
AACACAACCA TTTACAAGTT AAATCAAGAT GGCAACTTAG CACAGCGTAC ACAGGTTAAA
TTAGGTAAAG GCTCTATAAA CCAAATACAA GTAATTGAAG GGTTAGCTGT TGGAGACAGA
GTGATCATTT CAGATTCAAG TAGTTGGCAA AAATATAAAA AAGTTAGAAT TAACTAA
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| Protein sequence | MDIAVKKQKK TLLKRVWPLA LVIAILAIAL NYSAFLLQAD YVIDDDTLVY GEVKQGPFSI
SVRGAGLLVP DKIKWLAASV DGHVERVVVK PGKSVKKGEL IIELSNPRLK QLQEETKWEL
EAIIAESKAS QAEQKSGLLF QKARMLDAKL NYQSSKLKLD AQRELFNNKT GAVSKIDYEK
TKLETQQFNQ RWKIQEEVLV SMTDNIVVQD NAHNSRINKM RKTLERAEQQ VKDLMIYASL
DSVVQDVSVE PGQRVNMGSN LAKLAQQDSL IAELQVAELL IGEVSIGQLV TIDTRNNTVS
GIVARVDPAV VNGNVQVDVT FTEALPSDAR PDLSVDGEIM ITDIADTLYV SRPIFSQRQS
NTTIYKLNQD GNLAQRTQVK LGKGSINQIQ VIEGLAVGDR VIISDSSSWQ KYKKVRIN
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