Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2108 |
Symbol | pgi2 |
ID | 3520071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2192747 |
End bp | 2194402 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284566 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_268834 |
Protein GI | 71279612 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.354435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTA AAAAATTAAG CTCTCTTGCC CATTGCGCTA AAACGCGTTC AATTGTTTCA TTGTTCGATC AAAAAGAACG TGCCAATGAC TTTTCTTTAT CAACATCTCA TTTATATTTA GATTACTCCA AGCAAAATAT CACTGATGTT GAACTAGAGC AATTAATTGA AATAGCTGAA GATGTTGGTC TATCAGAAAG TATTACCGGG CAATTTAATG GCGATAAGAT TAATAATACA GAAGGGCGTT CTGTATTGCA TACAATATTA AGAGCTCCAC AGGTAATTAA GCAACAGATA CTCGGTGATA CACTTGCTAA TGAGGTTGAA GCAGCTGAAC TGCAAATGGC CAAAGTAGTT AATGATGTAC AAAAAGGTAT TCTTACTAGT CATACGGGGC AGCGCTTTAC CGATGTTTTA GCTATTGGTA TTGGTGGCTC ATATTATGGC GTGAAAGTAA GTTTATCAGC CTTAGAGCAT TACCGTGATT TAGCTTTATC TGTTCATGTA ATAGCAAATG TTGATGGCGG AGCACTTGAA GAAAAACTTA AAACATTAAA TTTTGAAACA ACCCTCGTTG TCGTGATTTC GAAAACCTTT ACCACGCAAG AAACCATGCT AAATGCAAAA GCTGTCAAGC AATGGATGTT ATCTTGTGCG TCTGTAAAAG ATCTAGAGCT TAATAATGTA CCTTTAATCA TTGAGAAACA ATGGTTTGCA GTGAGTAGTA ATATTGAAGC AGCGAAAGAA TTTGGAATTA ATATAAAACA TATTCTGCCG ATGTGGGATT GGGTGGGAGG ACGCTTTTCC ATTTGGTCAA CGGTAGGGTT ACCCCTTGCT CTTGCCATTG GTAATGATAA CTTTAATAAA TTGAAACAAG GTGCATACGA GATGGATGTG CACTTTAAAT CAACTGACTT TAAAAACAAT ATGCCGGTTA TTATGGCATT GCTTGGCATT TGGAATCGTA ATGCACTTGA GTACCCGACT TTAGCCATTT TACCTTATGC CCATTCGTTA AGAGCTTTAC CTGGCTATTT ACAACAAACA GACATGGAAA GTAATGGTAA GTCGGTATCA AAATCAGGAG ATAAACTTTC TTGGTTAACG GCGCCTGTTG TTTTTGGTCA AGAGGGCACT AACGGCCAGC ATGCTTTCAT GCAGTTAATG CATCAAAGTG ATGACATCAT TCCAACAGAT TTTATTGTTG CCTTAAAAGG TCGAAGCCAA TATACCGAAA ATCATAAAGT ACTTGTTGCC AATTGTTTTG CGCAAAGTGA AGCCTTAATG CAGGGAAAAA CATTAACACA AGTAGAAAGT GAGCTAGAGA TGAGTGCTTT ATCTACCGCT GAAATATCAC TCATTGCTCC GCATAAAACC ATGAAAGGTA ATACTCCAAG TAATACGCTG GTTATGGACT TATTAACTCC TGAAACCATC GGTTCTCTGC TCGCGCTATA CGAACATAAA ATATTTGTTC AAGGGGTTTT ATGGCAAGTG AATTCCTTTG ACCAATGGGG CGTTGAATTA GGAAAGCAGT TAGGAACCCG AATCTTATCT GCTATAGATG GGGCTGAAGA TGATTTACTC TCTGCTTCTA GCCAGAGTTT AATTGCCCGA TTTAGAGCTC GTTCAAACGT TACTCCTTCG GTGTAG
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Protein sequence | MDIKKLSSLA HCAKTRSIVS LFDQKERAND FSLSTSHLYL DYSKQNITDV ELEQLIEIAE DVGLSESITG QFNGDKINNT EGRSVLHTIL RAPQVIKQQI LGDTLANEVE AAELQMAKVV NDVQKGILTS HTGQRFTDVL AIGIGGSYYG VKVSLSALEH YRDLALSVHV IANVDGGALE EKLKTLNFET TLVVVISKTF TTQETMLNAK AVKQWMLSCA SVKDLELNNV PLIIEKQWFA VSSNIEAAKE FGINIKHILP MWDWVGGRFS IWSTVGLPLA LAIGNDNFNK LKQGAYEMDV HFKSTDFKNN MPVIMALLGI WNRNALEYPT LAILPYAHSL RALPGYLQQT DMESNGKSVS KSGDKLSWLT APVVFGQEGT NGQHAFMQLM HQSDDIIPTD FIVALKGRSQ YTENHKVLVA NCFAQSEALM QGKTLTQVES ELEMSALSTA EISLIAPHKT MKGNTPSNTL VMDLLTPETI GSLLALYEHK IFVQGVLWQV NSFDQWGVEL GKQLGTRILS AIDGAEDDLL SASSQSLIAR FRARSNVTPS V
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