| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2014 |
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| Symbol | sbcB |
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| ID | 3520948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 2086576 |
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| End bp | 2088039 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284476 |
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| Product | exonuclease I |
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| Protein accession | YP_268744 |
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| Protein GI | 71280482 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.516095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGACA GAACATCTCA GAACAACACA GAACAACCAT CAATCCTTTG GCACGATTAT
GAAACTTGGG GAATAAACCC AAAATTTGAT AAACCGTCTC AATTCGCCGG CATTCGTACT
GATCTCGATT TAAATATCAT TGGCGAGCCT GAAATGTTTT ATTGCACGCC GCCCGTTGAT
TACTTACCAC ATCCTGAAGC CTGTTTAGTT ACAGGTATCA CGCCACAAAA AGCGCAACGT
GAAGGCTTGT CTGAGGCTGA ATTTGCTGCA CGTATTCATA CTTTATTTAC TCAGCCCAAT
ACCTGTGTTG CTGGCTATAA CAGTATTCGC TTTGATGATG AGGTGACTCG TTATCTGCTT
TATCGTAACT TTTATGACCC TTATGCACGT GAATGGCAAA ATGGAAATAG TCGCTGGGAT
ATTATAGATA TGGTTCGTGC TTGTTATGCA CTTCGTCCTG AAGGCATTAA TTGGCCAACC
GTTAAGCGCG ATGGTGAAGA AGTCATCAGT TTCCGTTTAG AGCTATTAAC GGCAGCAAAT
GACATCAGTC ATGAAGCGGC CCATGATGCG ATGAGTGATG TTTACGCCAC CATAGCAATG
GCTAAATTGA TCAAAGAAAA ACAACCAAAA CTTTATGATT TTATCTTTAA CTTGAAGAAT
AAAAATCAAG TGAAAGATTT GATCAATACC GCAGAGATGA CACCTATTGT GCATACTTCG
AGCAAAGTAT CATCAGCTCA TGGCTGCACC AGTTGGTTTG CGCCAGTAAG TTACCACCCA
GTTAATAAAA ACGCGGTGAT CTGTGTCGAT TTAGCACGAG ATATATCACC TTTATTAACG
CTTAGCAGTG AAGAGATTAA AGCGCGTTTA TATACCCGTT ATGACGATTT AGCGCCAGAT
GAACTACCAA TTCCAGTAAA ACTTATTCAT GTCAATAAAT GCCCTGTTAT AGCGCCAGCT
AAAACGTTAC TACCAGAAAA CGCAGAGCGC TTAGCAATAC CGCGCGATGT TTGCTTAGAT
AATTTAGCTC TATTGAGAAA GCATGCTGAA CTAAGAGATA AATTAAGCGA TGTTTTTGCC
ACATCAGACT TTGATAATGA TGACGTAGAT GCAGAGCAAG CGTTATATGG TGGCAGTTTC
TTTAGTCATA GTGATAAAGC GCAAATGGAT ATTTTACGTG GTCTATCACC TGAGCAACTA
GCTAATCATC CATTTCAATT TCAAGATGAG CGTTTAAGTG TATTACTGTT TCGCTATCGA
GCAAGAAACT ACCCGTACAC GCTATCTACA GAAGAACAAC AGAAATGGCA GCAGTATTGT
CAGAACAAAC TGCAATATGG CGGGAAAGGT ATTTTATCAC TTGATGAGTT CATGATGAAG
ATTGAAAATC TAGCCCATGA GCATGAAACT GATAAAGCAA AAATGTCGGT ATTAAAAGCC
TTGTATGAAT TCTTGCAAGG GTAA
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| Protein sequence | MQDRTSQNNT EQPSILWHDY ETWGINPKFD KPSQFAGIRT DLDLNIIGEP EMFYCTPPVD
YLPHPEACLV TGITPQKAQR EGLSEAEFAA RIHTLFTQPN TCVAGYNSIR FDDEVTRYLL
YRNFYDPYAR EWQNGNSRWD IIDMVRACYA LRPEGINWPT VKRDGEEVIS FRLELLTAAN
DISHEAAHDA MSDVYATIAM AKLIKEKQPK LYDFIFNLKN KNQVKDLINT AEMTPIVHTS
SKVSSAHGCT SWFAPVSYHP VNKNAVICVD LARDISPLLT LSSEEIKARL YTRYDDLAPD
ELPIPVKLIH VNKCPVIAPA KTLLPENAER LAIPRDVCLD NLALLRKHAE LRDKLSDVFA
TSDFDNDDVD AEQALYGGSF FSHSDKAQMD ILRGLSPEQL ANHPFQFQDE RLSVLLFRYR
ARNYPYTLST EEQQKWQQYC QNKLQYGGKG ILSLDEFMMK IENLAHEHET DKAKMSVLKA
LYEFLQG
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