| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_2004 |
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| Symbol | lysC |
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| ID | 3521095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2075060 |
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| End bp | 2076430 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284466 |
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| Product | aspartate kinase III |
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| Protein accession | YP_268734 |
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| Protein GI | 71280627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATTCAG TTCAATCTAC ATCATCTTTA ACTGTTGCCA AGTTCGGCGG TACTAGTGTT
GCCGATTACC AAGCTATGCT TCGTTGCGCC AATATTATTA AAAATGATAA CAGCAATCGT
CTAGTGGTTG TTTCAGCGAG TTCAGGCGTG ACAAACCTGC TAGTTCGCTT AAGTCAGAAA
AATGTATCTG TCATTGAGCA AAAGGATATT GTTGAAAATA TCCGCGCTAT TCAAGTCAAT
ATTACTCAGC ATTTATCAAG CGATGTTGAA GCACAGCTTA ATCAAGAAAT AAACAGCTTA
CTTGATGAAC TAACTCAACA TGCACTAACG CAGTTATTAC AATACTCGAC TAAGACAGCA
GATGCCATTC TTGCCTTTGG TGAGCAATTT AGCTCGCGAA TTTTTGCTCA AGTTTTACAA
TCTGTTGATA TTCCAGGTGA GTATTTCAAT GTGCAACAAG TGATGAAAAC CAATAGTTTA
TATGGCAAAG CGGTAGTAGA TCTTAATCAA TTGAGTGAAC AAAGCACACA ACTGCTTGCC
CCAAAACTGA TTGACAAAGT GATTGTTACT CAGGGATTTA TTGGTCAAGA TAGCCAAGGT
CATACGACTA CGCTAGGGCG AGGTGGATCC GATTATTCCG CAGCATTACT TGCTGAAGCT
TTAAATGGCA CTAATTTATC TATTTGGACG GATGTTGTAG GTATCTTTAC TACCGACCCG
CGTATTACTG ACCAAGCGCG CGCGATTAAA GAAATTAGCT TTGGCGAAGC GGCCGAAATG
GCCACCTTTG GCGCGAAAAT ATTACACCCC GCGACACTGA TCCCTGCAAT GCGCCGCAAT
ATTCCAGTTT TTGTTGGTTC AAGTAAAGAG CCAGAAAAAG GTGGTACGCA AATTAAGCAA
AAAGTTGATT CGAATCCCAC TTATCGCTCC ATTGCATTAA GACGTGAACA AACGTTAGTG
ACGGTAAAAA GCCCGGCTAT GTTACATGCT AGCGGATTCT TAGCAAAAGT GTTTGGCGTA
TTAGCGAAAC ATGAGTTAAG CATTGATTTG ATCACTACCA GTGAAATTAG TGTCGCTTTA
ACTTTTGATA ACCCAAGTGG TTCAACGCAA TCGTTAATTA CTAATGCCGT GGTGGCAGAA
TTAGAGCAGT TATGTGAAGT TAGCGTTGAG CATGGTTTAT CGCTAGTTGC TGTGATTGGG
AATGGTTTAA CGTGTGCTAA AGGTATTGGT CAAAGCATTT TTGAAACGAT TAATGATGTG
AATATCCGTT TAATTTGTCA TGGCGCTAGT GCCAATAACT TATGCTTTTT AGTGAATGAA
GATGAGGCAA ATTATGTGGT TGAGAAATTA CATAATACCT TATTCGCTTA A
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| Protein sequence | MNSVQSTSSL TVAKFGGTSV ADYQAMLRCA NIIKNDNSNR LVVVSASSGV TNLLVRLSQK
NVSVIEQKDI VENIRAIQVN ITQHLSSDVE AQLNQEINSL LDELTQHALT QLLQYSTKTA
DAILAFGEQF SSRIFAQVLQ SVDIPGEYFN VQQVMKTNSL YGKAVVDLNQ LSEQSTQLLA
PKLIDKVIVT QGFIGQDSQG HTTTLGRGGS DYSAALLAEA LNGTNLSIWT DVVGIFTTDP
RITDQARAIK EISFGEAAEM ATFGAKILHP ATLIPAMRRN IPVFVGSSKE PEKGGTQIKQ
KVDSNPTYRS IALRREQTLV TVKSPAMLHA SGFLAKVFGV LAKHELSIDL ITTSEISVAL
TFDNPSGSTQ SLITNAVVAE LEQLCEVSVE HGLSLVAVIG NGLTCAKGIG QSIFETINDV
NIRLICHGAS ANNLCFLVNE DEANYVVEKL HNTLFA
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