| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1961 |
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| Symbol | |
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| ID | 3521865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 2026531 |
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| End bp | 2029647 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284423 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_268691 |
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| Protein GI | 71281393 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA CCAAGAGCGC CTTAACTAGC CCAGCAGCCG TTGCTGTAGT TGTTGCCCTA
ACTCTGCTAG TCGGCATGCT CAGTTTATTT AAGTTACCCG TTCAGCTTTT TCCTGATATT
GAACGTCCAC AAATAGCGGT ACAAACCTTT TGGCGATCGG CATCACCTAA AGAAATTGAA
TCTGAAATCA TTGAACCCCA AGAGCAAGTA TTGCGAGGTA TCCCTGGTAT AGAGTCAATG
AATGCTTTTG CCAATAGAGG AAGTGCTTAC ATAAACTTGT CGTTTGGTGT TGGCACTAAT
ATGGAGCAAA CCTTAATTGA AGTGATAAGT CGAATGACTC GTGTGGCCAA TTTGCCACGT
GATGCCAGAC CGCCACGAAT AATGCTTGGC GGTTTTGGGG GCAATACTCC CGCGCTAACC
TATTTCTTTT TACAAGCTTT ACCGGGCAAT ACTCAAGATA TTAACCAATA TATCGACTTT
ACTAATGATG TTATTAGGCC GCGCCTTGAA GCGGTTGAAG GGGTTGCTGG CGTGCAAACC
TTTATGGAGC AAAATAGGGA AGAGCTACAG ATCCGATATG ACCCTATTAA AGCGGCAGAA
TATGGTATCG AAATTCCAGA ATTAATCGCT TTAGTTTCGG CAAGTGATGA CATTTCAGGT
GGTTTTGTCG ATGTTGGCAG ACGTCAATAT ACCTTGCGAT ATAGCGGTAA ATACAGTGTT
GATGAATTAT CACAATTAAT GCTTGAGTCA CGTGGTGGTC GTAATATTCG TTTAAGTGAT
ATTGCTACTG TTGAGGTGCG TCGTAACGAT AGACAAGGAC TGGCAGTTCA AAATGGTAAT
CCTGCTTTTT CAATGCGCAT AGACAGAGCC AATGGCGCTA ATGTATTAGA AACGCTAAAT
CGCGTTAAAA CAGAAGTGGC ATTACTTAAT AATGAATTAC TCGCGGATAA AAAATTAGTG
ATGGTGCAAT CTTTTGATGC CTCGGTCTTT ATTTATCGCG CCATTAATTT AGTGACTAGT
AATCTATTTG TCGGAATTGT TTTATCGTTA TCGGTTTTAT GGTTCTTTAT TCGTCGAGCC
CGCGCTACGT TCATTATTGC TACCGCTATC CCGGTAAGCT TGTTAAGTAC TTTTATCGTC
TTGGAAATAA CGGGGCGGTC GCTCAATGTT ATCTCATTAG CGGGTTTAGC TTTTGCAGTA
GGCATGGTGC TTGATGCCGC CATTGTGGTG TTAGAAAATA TTTTACGAAT GCGTGATAAA
GGCTTAGATG AACATGATAG TGCGGAGCAA GGTGCAGGGC AGGTGTGGGG CGCTTTACTT
GCTTCTACTG CGACAACCGT TGCTATATTT CTACCAGTAT TTTTCTTAAA AGATATTGAA
GGGCAACTCT TTGGTGATTT AGCGTTAACT ATTGCCATTG CGGTGTCGGT GTCACTTATC
GTTGCCGTAG TGCTGCTACC TGTTTTAGCA AAATATTTTC TCAAACAACA AGAAGTGAAC
GATCCGAATA AAAAACTGTG GCAGAGAATT ACCCGTTTTG TGATGAACAG CACCAGTAGT
CGAGCTAAGC GCTTGTCACT CGCTGCAAGT CTTTTAATAT TACCGGTTGT CATATCTATT
ATTGCCATAC CAAAACTTGA TTATTTACCA CCAGTAAAGC GCGATGCTAT TGATGCGAAC
TTGCAATTTC CGCCCGGTGC AAATGTCAAA ACTATAGAGA AGGAAATTAT CCAACCAATT
GTCGAGCGAT TAAAACCATA TATGGATGGC ACTAAAGAAC CAGCATTGAA AAACTATTAT
ATTTTTGGTG GACCCTTTGG TGGCAGTTTA GGCGTTAGGG TAAAAGATCA AGACCGAGTT
GATGAGCTAC TTGACATTGT TCAGAATGAA ATACTTATTG ACCTACCCGA TACACGAGCG
TTTGCGAGAC AAGGTAACTT GTTCGGTGGT TTTGGTGGCG GTAGACAAGT ACAGGTACAT
CTGCAATCTA AAGATACCAA AGCACTGCAA GAAGTAGCTC GCCAAGGTAT GGATTGGATA
AAAGAAGCGA TTGAAGGGGC GAATGTTAAC GCCAACCCTG GTCTTGCTAT GTCAGAGCCA
GAGATTAACT TAAGCCCGAA CGATCGTAAT ATTTTAGAGC AAGGCTGGAA CCGTCGAGAT
GTAGGTCGCG TGGTGAGAAC CTTGGGTGAT GGTCTGTATG TTGGTGAGTA TTTTAATGGC
AGTAAACGGT TGAACATGAT TTTACGTGCC GATGGCTGGG ATGATCCCGA TAACTTGGGA
GATGTGCCTG TTGTTACAGG AAATGGCAGC GTTACACCGT TATCAAACTT AGTCGATATA
CAACGTACAG TTGGACCAAG CCGATTAACG CGTATTGATG GACAACGTAC CATTAGTTTG
AATGTTAACC CGCCTAAAGG TTGGTCGCTG GAAGAAACGA TATCAGCATT AAAGTTACAG
GTAGAGCCAA AGTTACGAAA TATCATGCCA AATGATGGCA ATATTCAATA TGGTGGCAGT
GCTGACCAGT TAGATAAAGC GATTAGTGTT ATGGCAGAGA ACTTTGCTTT TGCTTTAGTT
ATTCTGTTTC TATTAATGGC TGCCTTATTC AAGTCCATCA AGGATAGTTT ACTGGTTGTT
ATTACCATTC CTTTAGCCAC GGTTGGTGGT ATTTTAGCGC TACAACTACT TAACCTCACT
GTTTTTCAAC CACTCGATTT ACTGACTATG ATAGGTTTTA TCATTTTACT GGGATTAGTG
GTTAATAACG CCATTTTATT AGTACATCAA ACACGTTTAG GCCAACAAGA TGGTCTTGAA
CGGACACAAG CTATTGAGGA AGCGTTGACC TTACGTTTAC GGCCTATTTT TATGAGCACA
GCAACCAGCT TTTTTGGCAT GTTACCACTG TTACTTATGC CTGGCGCTGG CAGTGTTATA
TATCGCGGTT TAGCCGCGGT TATCGTCGGT GGTTTAGCCT TTAGTACAAT ATTTACCATC
GTTTTACTGC CATGTTTGTT AAGACTCTCT AAGCATGATT TTTTCTTAAG TCGGAGTAAA
AATCAGAGTA AACAAAGTGC AGTACAACAA TTACCAAACG CTAGCGTTAA CCCGTAA
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| Protein sequence | MKLTKSALTS PAAVAVVVAL TLLVGMLSLF KLPVQLFPDI ERPQIAVQTF WRSASPKEIE
SEIIEPQEQV LRGIPGIESM NAFANRGSAY INLSFGVGTN MEQTLIEVIS RMTRVANLPR
DARPPRIMLG GFGGNTPALT YFFLQALPGN TQDINQYIDF TNDVIRPRLE AVEGVAGVQT
FMEQNREELQ IRYDPIKAAE YGIEIPELIA LVSASDDISG GFVDVGRRQY TLRYSGKYSV
DELSQLMLES RGGRNIRLSD IATVEVRRND RQGLAVQNGN PAFSMRIDRA NGANVLETLN
RVKTEVALLN NELLADKKLV MVQSFDASVF IYRAINLVTS NLFVGIVLSL SVLWFFIRRA
RATFIIATAI PVSLLSTFIV LEITGRSLNV ISLAGLAFAV GMVLDAAIVV LENILRMRDK
GLDEHDSAEQ GAGQVWGALL ASTATTVAIF LPVFFLKDIE GQLFGDLALT IAIAVSVSLI
VAVVLLPVLA KYFLKQQEVN DPNKKLWQRI TRFVMNSTSS RAKRLSLAAS LLILPVVISI
IAIPKLDYLP PVKRDAIDAN LQFPPGANVK TIEKEIIQPI VERLKPYMDG TKEPALKNYY
IFGGPFGGSL GVRVKDQDRV DELLDIVQNE ILIDLPDTRA FARQGNLFGG FGGGRQVQVH
LQSKDTKALQ EVARQGMDWI KEAIEGANVN ANPGLAMSEP EINLSPNDRN ILEQGWNRRD
VGRVVRTLGD GLYVGEYFNG SKRLNMILRA DGWDDPDNLG DVPVVTGNGS VTPLSNLVDI
QRTVGPSRLT RIDGQRTISL NVNPPKGWSL EETISALKLQ VEPKLRNIMP NDGNIQYGGS
ADQLDKAISV MAENFAFALV ILFLLMAALF KSIKDSLLVV ITIPLATVGG ILALQLLNLT
VFQPLDLLTM IGFIILLGLV VNNAILLVHQ TRLGQQDGLE RTQAIEEALT LRLRPIFMST
ATSFFGMLPL LLMPGAGSVI YRGLAAVIVG GLAFSTIFTI VLLPCLLRLS KHDFFLSRSK
NQSKQSAVQQ LPNASVNP
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