| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1902 |
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| Symbol | |
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| ID | 3518543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1959942 |
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| End bp | 1962197 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284364 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_268632 |
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| Protein GI | 71278871 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.357712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACCA ACATTGTGAC TAGCACTGAT AATACCGGTA GGTTTAACCT AACGGTTGAG
CTAGGAAAGT ATGAATTACA TGTCGTTGCC AGCGCTTACG TACATAAAAA TATTCAAGTC
GACTTAGCTA AAAATCAGAA TCCCGAACTC ACGGTACAAT TAGATAAATC AGCACTAGAA
ATTATTGATG TTAGTGCTAC TCCTTTTCAT AGCTCAAATA TCGAATCAGC ATTACCTATC
ACTGTATTAC ACGGTGAAAG CTTACGTATG CGCCAAGCGA ATACCTTGGG TGATACGTTA
AACAAAGAAG TGGGAGTTCA TAGTAGTTTT CATGGTGGTG TAGCCAGTAC CCCCATTATT
CGAGGTTTAG ACGGACCACG AGTATTAATT ACACAAAATG GTTTAGATGC TGGCGATGCT
TCACGTGTTG GTCCCGATCA TGCTGTTTCT ACTGAAACAT CAACCAGTGA GCGTATTGAA
GTTCTACGCG GCCCAGCAAC CTTGTTTTAT GGTAGTGGTG CTATTGGTGG TGTAGTGAAT
ATTGTTAATG AGAGTATTCC TAAAAGTACA GAGACTTCAG GTGAATGGTT AACAGAATAC
AATAGTAATA ATGAGCAGAC ATTAGCGTCT GGCTCGTTTA CCAGTGGTAC CGGTAATATT
GCGGTACATG CAGATGGCTT TTATCGCGAC AGCGAGAACT ATCAAATACC TGAAAAAGAT
GGTGTTGACG AAGTAGCTAA TTCAGCAGCG GAATCAAGTG GCTTCACCTT AGGTACCAGT
TATTTATTAG ATAACGGCTT TGTTGGATTG TCTTATCAGA ATTTAGAACA AGAATACGGT
ATACCAGGCC ATAGTCATGG CGATGAAGAC ATAGAAGTTT CTGCCGACTT AACCCAAAAT
CGCTTTCAAC TATTAAGTGA ACTTAGTTTT GATAATAATG TGATAAAATC ACTTAATACC
AAGATTGGTT ATACTGATTA TCGTCATACA GAAGTAGAGT TGGGTTTGGT CGGCACTACC
TTTGATAACG AGTCGATAGA AGCGAGAGTT GAACTATTGC ATCAAGACTT CTTGGATTGG
CGTGGTGGCT TAAGTCTTCA CTATAAACAA AGTGATTTTA CTGCAGTTGG CGAAGAGGCA
TTTACACCCC CATCAGAAAC AAATTCACTC GGCTTAGCCT GGATAGAAGA ACGTCATTTT
GGTGACTTTT TAGTACAACT TGGTGCGCGT ATTGAACGTA CTGAAGTGAC CGCGGCTAAA
GTTCGTTTGC CAGAACTTGA ACTCGTTAAG TCTGCTCATG ATGATCACGG CGCAGACGAT
GATGCAGGAC ACGACTCGCA TGATCATGGG GCTCATGAAA CACAAGGTTA TACCCGCAAT
TTTAATGTCG AACATGTTTT TACTCCGATT AGTCTTTCTG CTGGTCTAGT GTGGGATTTC
ATCGATGGTT ATAATGTAGG TTTATCATTA TCTCATTCAG AACGTGCTCC ATCTGCTGCG
GAACTATTAT CTTTTGGTCC TCATATTGGT ACCGGTTCAT ATGAAGTAGG TGCTTTGTTT
GCATTACATG ATGACCACGG CGAAGCTGCT CACTTTGGTT TGACTGATCA TGATATTGTC
ATGGAAACCG CCAATAATAT TGATCTAAGT TTACGTAAGT TTAAAGGTGA CTTCGGTTTC
ATCTTTAATG TTTTTTATAA CCAAATAGAT GATTACTACT ATGAGCAAGC GACTGGTTTC
TCGGCTGGTG ATGGTCATGA TCACAGCGGA CACGGACACG GCGGCGAAGT AGAAGAAGCC
CATACGTTAC CGCTTTATAC CTTTACCGCT CAAGATGTAT CCTTATATGG ATTTGAAGCA
CAGCTTGTTT GGCAAGTGAC TGATGAGTTT ACTTGGCGAG TACAAGGTGA TGTGCTTCGT
GCACGTTTAG ATGAGGGGGG AGAATTACCT AGAACACCAC CTGCCCGTAT TGCGACCGAA
TTAAGTTATC AAGGCGAAAG TATTTCTGCC GACTTATTTG TCAGCCACTA TTTTGAACAA
ACGCATACTG CCGAACTAGA AACCTCAACA GACAGCTATG TCATGGTTGA TGCCAACGTT
AACTATCACT TTTCTTTAGG ACAGCATGAC TTAGCTGTGT ATCTAAAAGC AATAAACTTA
ACAGATGAAT ACGCACAAGT GCACACATCA TTCTTAAAGG ATTTAACACC GCTAGCAGGA
CGTTCAGTGG CGCTGGGTTT ACGCGGTTCA TTTTAA
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| Protein sequence | MGTNIVTSTD NTGRFNLTVE LGKYELHVVA SAYVHKNIQV DLAKNQNPEL TVQLDKSALE
IIDVSATPFH SSNIESALPI TVLHGESLRM RQANTLGDTL NKEVGVHSSF HGGVASTPII
RGLDGPRVLI TQNGLDAGDA SRVGPDHAVS TETSTSERIE VLRGPATLFY GSGAIGGVVN
IVNESIPKST ETSGEWLTEY NSNNEQTLAS GSFTSGTGNI AVHADGFYRD SENYQIPEKD
GVDEVANSAA ESSGFTLGTS YLLDNGFVGL SYQNLEQEYG IPGHSHGDED IEVSADLTQN
RFQLLSELSF DNNVIKSLNT KIGYTDYRHT EVELGLVGTT FDNESIEARV ELLHQDFLDW
RGGLSLHYKQ SDFTAVGEEA FTPPSETNSL GLAWIEERHF GDFLVQLGAR IERTEVTAAK
VRLPELELVK SAHDDHGADD DAGHDSHDHG AHETQGYTRN FNVEHVFTPI SLSAGLVWDF
IDGYNVGLSL SHSERAPSAA ELLSFGPHIG TGSYEVGALF ALHDDHGEAA HFGLTDHDIV
METANNIDLS LRKFKGDFGF IFNVFYNQID DYYYEQATGF SAGDGHDHSG HGHGGEVEEA
HTLPLYTFTA QDVSLYGFEA QLVWQVTDEF TWRVQGDVLR ARLDEGGELP RTPPARIATE
LSYQGESISA DLFVSHYFEQ THTAELETST DSYVMVDANV NYHFSLGQHD LAVYLKAINL
TDEYAQVHTS FLKDLTPLAG RSVALGLRGS F
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