| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1887 |
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| Symbol | exaA |
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| ID | 3518846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1947920 |
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| End bp | 1949683 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284349 |
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| Product | quinoprotein alcohol dehydrogenase |
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| Protein accession | YP_268617 |
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| Protein GI | 71278551 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.186722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACAA CATGTAAAAC AAAGGTATTG TCATTATCCA TGGCAGTTTC TTTAGCGTTA
ACCGGCATAG CAAGTGCTGA AGTAACCGAT AAAGATATTG CCAATGACCA AATGACAACT
GATGATGTTG TGTCCTATGG ACTTGGTCTA AGAGGACAAC GTTACAGCCC TCTTGATAAA
ATAAATATCG ACACAGTTAA AGAAATGCGT CCAGTGTGGT CATTCTCATT AGGCGGCGAA
AAACAGCGTG GTCAAGAATC TCAGCCTATG GTCAAAGATG GCGTCATGTA TATTACTGGC
TCCTACTCTC GTGTGTATGC TATAGACGTT CATACTGGTG ACGAACTTTG GCAATATGAT
GCAAGATTAC CTGATGGTAT TATGCCTTGT TGTGATGTTA TCAACCGTGG TGCCGCGTTA
TACGGCGACC TAGTTATTTT TGCTACGCTT GATGCAAAAC TAGTCGCGCT TCATAAAGAC
ACAGGTAAAG TCGTTTGGAA AAAGAAAGTA GAAGATTATA AAGCCGGTTA TTCAATTACA
GCTGCTCCTA TTATTGTTAA AGGTAAAGTC ATCACAGGTG TTGCCGGTGG TGAATTTGGT
GTAGTAGGTA AAGTAAGAGC TTATGATGCT ACCAATGGCA AACTAGTTTG GGAACGCCCA
ACAGTTGAAG GCCATATGGG CTACATCTGG AAAAATGGCA AAAAAGTTGA TAATGGTATT
TCTGGTGGCA AACCAGGACA AACATGGCCA GCAGAACTTT GGAAGTCAGG CGGAGCGGCG
CCTTGGTTAG GCGGTACTTA TGATGCCGAT GTTGATTTAT TATTCTTTGG TACTGGTAAC
CCTGCACCAT GGAACTCTCA TTTACGTCCA GGTGATAACC TTTTCTCATC ATCACGTTTA
GCTATTGATC CTGATACTGG TAAAATTGTT TGGCATTTCC AAACCACGCC ACATGATGGT
TGGGATTTTG ATGGTGTTAA CGAGCTGATT TCTTTCGACT ATAAACAAAA TGGTAAAACC
GTTAAAGCTG CAGCAACGGC TGACAGAAAC GGTTTCTTCT ATGTACTTAA TCGTGAAAAT
GGTGATTTCA TTCGAGGTTT CCCATTTGTT GATAAACAAA CATGGGCTTC AGGACTTGAT
AAAAACGGTC GCCCTATTTA TATCGACAGT AATAGACCTA CGGATCCAAG CAAGTCAAAA
GATGGTAATA AAGGTAGCAC AGTTGTTGCC GCCCCTGCTT TCTTAGGTGG TAAAAACTGG
ATGCCAATGG CTTACAGTCA AGACACTGAG TTATTCTATG TACCATCTAA CGAATGGGAA
ATGGATATTT GGAATGAGCC GACCGCTTAT AAAAAAGGCG CTGCCTATCT AGGTGCTGGC
TTTACTATAA AAGCGATTAA TAAAGACTAT ATTGGTGTAT TAAAAGCAAT CGACCCTAAA
ACAGGTGAAG TTGTATGGCG CTATAATAAC TATGCTCCAT TATGGGGTGG CGTATTGGCT
ACTGCTGGTA ACTTAGTATT TACCGGTAAC CCTGAAGGAT ACTTATTAGG TCTTGACGCT
AAGACGGGTG AAGTTAAATA TAAGTTTAAT ACCGGATCAG GCATTGTTGG TTCACCGATC
ACCTGGGAAA TGGATGGCGA ACAATACCTT TCAGTTTTAT CTGGTTGGGG TGGCGCTGTA
CCTTTATGGG GCGGTGATGT TGCTAAGCGT ATCAAGCACT TAAACCAAGG TGGTAGTGTG
TGGACGTTTA AATTACCTAA ATAA
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| Protein sequence | MITTCKTKVL SLSMAVSLAL TGIASAEVTD KDIANDQMTT DDVVSYGLGL RGQRYSPLDK
INIDTVKEMR PVWSFSLGGE KQRGQESQPM VKDGVMYITG SYSRVYAIDV HTGDELWQYD
ARLPDGIMPC CDVINRGAAL YGDLVIFATL DAKLVALHKD TGKVVWKKKV EDYKAGYSIT
AAPIIVKGKV ITGVAGGEFG VVGKVRAYDA TNGKLVWERP TVEGHMGYIW KNGKKVDNGI
SGGKPGQTWP AELWKSGGAA PWLGGTYDAD VDLLFFGTGN PAPWNSHLRP GDNLFSSSRL
AIDPDTGKIV WHFQTTPHDG WDFDGVNELI SFDYKQNGKT VKAAATADRN GFFYVLNREN
GDFIRGFPFV DKQTWASGLD KNGRPIYIDS NRPTDPSKSK DGNKGSTVVA APAFLGGKNW
MPMAYSQDTE LFYVPSNEWE MDIWNEPTAY KKGAAYLGAG FTIKAINKDY IGVLKAIDPK
TGEVVWRYNN YAPLWGGVLA TAGNLVFTGN PEGYLLGLDA KTGEVKYKFN TGSGIVGSPI
TWEMDGEQYL SVLSGWGGAV PLWGGDVAKR IKHLNQGGSV WTFKLPK
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