| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1850 |
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| Symbol | |
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| ID | 3519485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1901997 |
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| End bp | 1902650 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284312 |
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| Product | putative tonB protein |
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| Protein accession | YP_268580 |
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| Protein GI | 71278176 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.473086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA CCTTTGCAAG TCCGCTGGCA AATAAAAACA CAAAAAACAA TCAACAAAGC
CCATCACCCG AAGTGTTGCA CAAACCCCCA GAGCCAATTC ATAAAACGCC TGTACTTAAA
GCTGTGGCCA CAATTAAAAA ACAGGTGAAA CACTTAGTTT CCGTATCGGT ACAAAAACCT
GTACCTGTAA AAAAGGTCGA GATAGAGCTG GCGAAGAATA ATAACAATAC AAAACCTAAT
GAAAATGATG TCGAAAAAAA TAACGAAGCT ACAACGATTG AAAATAGTAG CGAGTTATCG
CATCCCCCCT CTCTCGTTAA AAGTACCAAT AGTGTTGAAA GGAAGCCAAG TACTGGCGTG
GAATCAGCTT TGCAGTTATA CATGACGCAA GTGCGTGATT ATATTGCTAA ACACAAGCGA
TATCCTAAAG AAGCTAAAAT TAGAAGACAC CAAGGAAGAG TGAGCATCAG CTTTATTATT
GATGCCGATG GGCGGGTATC GGAATCTAAA ATAGTTAAGT CTTGCAAGAG TCGTTACATT
AATAAAAGCG TTAAAGTATT ACTTTCAAAA CTCAGATTTA AAGTAGCACC GAAGACAATA
AGACATCAAT TTCCTAAGAC TATTTTATTG GAAGTAAATT ATCAATTTAG CTAA
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| Protein sequence | MKLTFASPLA NKNTKNNQQS PSPEVLHKPP EPIHKTPVLK AVATIKKQVK HLVSVSVQKP
VPVKKVEIEL AKNNNNTKPN ENDVEKNNEA TTIENSSELS HPPSLVKSTN SVERKPSTGV
ESALQLYMTQ VRDYIAKHKR YPKEAKIRRH QGRVSISFII DADGRVSESK IVKSCKSRYI
NKSVKVLLSK LRFKVAPKTI RHQFPKTILL EVNYQFS
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