| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1848 |
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| Symbol | |
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| ID | 3522987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1897547 |
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| End bp | 1900711 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284310 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_268578 |
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| Protein GI | 71282512 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAA AGAGCTTAAT GAAAAGCAAG AGCATAACGT CAAATAAAAG CATACTGTCA
GCTCCTTCAC TTTGGATGAT TGATAACCCT ATAGCCTCAA GCTTATTAAC CTTTTCGATT
ATTATTCTTG GCTTACTGTC GTTTAATAGT ATTAACCAAG AGAGTAGCCC TTCGTTTCAG
ATTAATGAAA TTTTAATCGA AACAAGTTAC CCGGGTGCCA CGCCAAAAGA TATCGAACAA
GGTATCATTT TAAGCATTGA ACATCAGTTA AGAGACAATC CTAATATTGA CCGAATAAGC
GCCAATGCCT ACGAAGGCTC AGCTGAAATC ATAGTAGAGT TAATTGAAGG CGTTAACCCT
GACACTATAT TGTCGCAAGT TAAAAACAGT ATCGAGGGCA TAAATAGCTT CCCCGTTGAA
ATGGAAAATC CAACGATTAC CTTTGTTGAG GAGCTTGACA GTATTGTTGA AATTGGACTG
CATGGTAATG TATCAGAATT GCTGCTCTAC CGTGAAGCCT CACAACTAAA ACAAGCGATG
TTAGACGCAC TTGATTTAGC AAAAATTGAC ATCCAAGGTG CACGTTCCCC TGAAATAGTC
ATTGAACTTA ATCAAGTAAA ATTACGTCAA TATCAGCTCA CTTTAGCGCA AGTTTTATCT
AAAGTGAAAA CATCGGTGAC CGATGTACCT GCTGGAAGTA TTAATACGCA AGGTGGTGAA
ATTTTAATTC GAACCTTGGG TCGAAAAGAA TTATCCGAGC AGTTTTCAGA CATAACTATC
ATTACTGACG ACAGTGGCAA TAGCGTGACA CTCGCTGACA TTGCAACCAT TAGCGATAGC
TTTCAAGGGC AAATAAGACC GTTTAAAGTC AATAGTGACG CAGGATTAGA GCTAAAGGTT
TATCAAAATA AAAACAGTAA ACCAATAGAG ATAAGTAAAG AAATTAACGC ATTTATTACG
GACTATCAAT CAGAAATACC CGCAGGATTA ACGTTAACCA TACTGCAAGA TCAGTCGGAT
CCTTTTAGTC AACGTATTAA CTTGTTAATT AGTAACGGTC TTATTGGCAT GTTGTTGGTT
ATCTTAGTGC TATCCATTTT TCTTGATTTA AGATTAGCTT TTTGGGTAAG CATGGGCATA
CCTATTTCGA TTATCGGCAC CTTAGGACTT ATGCCATTAC TGGATATTCC TATCAATATG
ATCACCCTCT TTGCTTTTAT CATTACCTTA GGAATACTGG TTGATGATGC GGTAATTGTT
GCTGAAAACA TTTACCTGAA AATACAGCAA GGTATTACGA TGAATATTGC TCTTAAAGAT
GGTGTGAAAG AGATGACTTT ACCTGTGGTA TTTTCAGTGA CAACTAACAT TATTGCGTTT
ATCCCTTTGC TGTATGTACC GGGTGAACTT GGTGTTATGT ATAAACCCAT GACCTTACTC
ATTTTCGCCA TTTTTACTGT CTCGCTTATC GAAGCCTTAT TGATTCTACC CCTTCATTTA
CGACATATTG ACAAGCCAAT GCGTTTTCGC GTTATATCTA ACGTTCAAGC TCATTGCTTT
AAGCGTTTCG ATCACCTTAA AACAGCCATT TATGCTAAGT GGTTAAGAAC CAGTTGTAAT
AACCCTGTTA CGATAATTAT CATCTTCTTA TCACTGGCTA CACTGGTTTT CTCGTGGGTT
TATAGTGGCC GAGTTGATTC AAGCTTTGTG CCTAAAATTG AATCTACACG AATAGATGCC
GAGGTTGAAT TTCCAACGGG CGCGCCGTTA AAAAATAAAA TCGACATTAT TAATTATATT
GAAGCGGCAG GTATAAAAGC TATTGAGAGC TTAAACGGGC AAGACGATTA TAAGTTTCGC
ATGCAAGATA TTGGCTCAAG CAGTGGTTCG TCAACTTTTA TGATTGTTAC AGATGATCAA
CGCAACTTTA CCGCTAAAGA GTTTGTCGAT GCTTGGCGGA TAAATATTGG TGAAGTACCT
GGCGTTAAAT CAATTTTCTT TGATTATCAA GTTGGTCCAG GTGGCGGCAA AGAACTGGTA
ATAGAATTGG GCCATAAAGA TGCTGATATA TTAACCCTTG CTGCCAAGGA GTTAATGAAC
GGACTCAATA GAATATCAGG CGTAACTGAC ATTGATAGCG CTTTGATGGA TGGCAAACTC
CAATACAACC TTACGCCAAC ACCGTTAGGA AAAAGTCTTG GTTTTAACAG TGACAATTTA
GGTGAATTGA TTCGTTTACG CTTTTTTGGT GGCGAAGCCA TTCGACAAAT AGTGGCGGGC
GACGAAGTAA AAGTAAGAGT GATGATGCAA AGAAGTCAGC AGTATTATGC CAATCAACTC
AACCGATTAA TCATTACGGC GCCTAATGGC GACAGTGTAG AATTAAGCCA AGTTGCCAGT
ATTACCACCA CTAAAGCAGC CACAAGCATT AACCGTGTTG ACGGCATTCA GTTAGTGGAA
GTTACCGCCA GTATATTACG ACAAGTAGCC AGTGCCTCGT TGATACTCAA AACGATTGAA
GAAGACTTAC TGAGCAATTT AAGCGCTAAA TACCCAGAGC TTGAGGTAGA ACTTGGCGGT
GAGGCTCGAA TTGAATCTAA AGTTAATGCG GAAATAATAA AAGGCATAGG CCTAGCATTC
GCGCTTATTT TTGCCATGTT AGCGATAATA TTTCGCAGCT ATCTGGACGC TATTTTAGTA
CTACTTATTA TTCCCTTTTG TTTGGCAGCC GCTATGTTAG GGCATATTGT GATGGGTTAT
TCGTTTAGCG TGATGAGCTT ATTTGGCATG ATTGCGCTTT CTGGTTTAGT TATTAATGGC
TCATTCGTTA TGTTGCTTAA AGTTAAAGCC TTGAGAAAGG AAGGTATGGG TCATAAAGAG
GCGGTAATTG AAGCTGCTTT GAATCGCTTT CGCCCTGTGG TACTAACAGC AGTAACCACT
GCAGCGGGTT TATTTCCTAT GCTGTTTGAA ACATCAACAC AGGCATTATA TTTAGTGCCG
ATGGTCATTA GTTTAAGTTT TGGTTCAGTA TTCTCTATTG CCACAATTTT GTTGTTAAGC
CCGGCAATGT TTACGTTATC AGAGCAATTT AAAGTCAATA ATGAAAAAAC TGAATCACTA
ACCAAGTCGA CTATAAATAC CTCGAAGGTA AGAGCATTCG GTTAG
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| Protein sequence | MTAKSLMKSK SITSNKSILS APSLWMIDNP IASSLLTFSI IILGLLSFNS INQESSPSFQ
INEILIETSY PGATPKDIEQ GIILSIEHQL RDNPNIDRIS ANAYEGSAEI IVELIEGVNP
DTILSQVKNS IEGINSFPVE MENPTITFVE ELDSIVEIGL HGNVSELLLY REASQLKQAM
LDALDLAKID IQGARSPEIV IELNQVKLRQ YQLTLAQVLS KVKTSVTDVP AGSINTQGGE
ILIRTLGRKE LSEQFSDITI ITDDSGNSVT LADIATISDS FQGQIRPFKV NSDAGLELKV
YQNKNSKPIE ISKEINAFIT DYQSEIPAGL TLTILQDQSD PFSQRINLLI SNGLIGMLLV
ILVLSIFLDL RLAFWVSMGI PISIIGTLGL MPLLDIPINM ITLFAFIITL GILVDDAVIV
AENIYLKIQQ GITMNIALKD GVKEMTLPVV FSVTTNIIAF IPLLYVPGEL GVMYKPMTLL
IFAIFTVSLI EALLILPLHL RHIDKPMRFR VISNVQAHCF KRFDHLKTAI YAKWLRTSCN
NPVTIIIIFL SLATLVFSWV YSGRVDSSFV PKIESTRIDA EVEFPTGAPL KNKIDIINYI
EAAGIKAIES LNGQDDYKFR MQDIGSSSGS STFMIVTDDQ RNFTAKEFVD AWRINIGEVP
GVKSIFFDYQ VGPGGGKELV IELGHKDADI LTLAAKELMN GLNRISGVTD IDSALMDGKL
QYNLTPTPLG KSLGFNSDNL GELIRLRFFG GEAIRQIVAG DEVKVRVMMQ RSQQYYANQL
NRLIITAPNG DSVELSQVAS ITTTKAATSI NRVDGIQLVE VTASILRQVA SASLILKTIE
EDLLSNLSAK YPELEVELGG EARIESKVNA EIIKGIGLAF ALIFAMLAII FRSYLDAILV
LLIIPFCLAA AMLGHIVMGY SFSVMSLFGM IALSGLVING SFVMLLKVKA LRKEGMGHKE
AVIEAALNRF RPVVLTAVTT AAGLFPMLFE TSTQALYLVP MVISLSFGSV FSIATILLLS
PAMFTLSEQF KVNNEKTESL TKSTINTSKV RAFG
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