| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1826 |
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| Symbol | torS |
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| ID | 3521440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1874624 |
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| End bp | 1877626 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637284288 |
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| Product | sensor protein TorS |
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| Protein accession | YP_268556 |
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| Protein GI | 71280971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.811683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCACTTTC GTCGAAGTAT AGGTAACAAA CTATTATTTG CCTTTAGCTT TGTTGCGGGT
TTACTGCTGT TTGTGAGTAT TGTCGCTTGG AATGGTCTCA GCCTTATTGC CAGCACTGGT
GATATTATTA CTCAACAAAC CTTACCTACC CTTTCAAGTG CAAGAGAATT AGCGAACCTT
AGTTTGCAAA TCACCCATAA GACGACGTTA TTAAAAAATG TCACCGATGA AGAACAGCGT
CAGGAAATCA GTCAGACATT AACATTGCTA CATTTGGCGG TTGAAGATAA ATTTATTGCT
CTTGAGTTAC TCAATCTCAA CAAGAAAAAT TTACCTTCGT TAATTAGTTT AAAGAAAGAT
ATTAACCAAG GCATTGAGCA ACTTGATCTC TATGCCAAAA ATAAAATCAC CAATCAACAA
CAACGTGATC AAGCCTTTAC TGTGGTGAAA GCATCGGTTC ATGAGATTTC TGTTTTATCT
CAATCACAGG TAGCTAATGC GAGTACCTTT GCGTTAGTTC GTTTATCAGG GCTTTATGAT
TTAATTGAGC AGAAAAGTAA TCTGCTACAA GCAAAACAAG ATATTGATTT AATCATTGAT
GAAGACCTTA ATTTACTTGA TAAAATGGCC GCGTTAGAGC GAAATGCTTT GGAGTTAGAG
CAAATTGCTA ACTTGGTTAT TACCACACAA CAGTACCAGC CGCTTAATGA GCTAACCCAC
AATAAAAACA GACTAGTGTT GCTGATATCA AACTTAGTGG ATTCAATTAC TGATCCCTAC
AGAGCTAACT TGGCCAATAT CGCACTTATT AAGCTTAATT TATTTGATAA CTTGCTTGAT
AATCAACAAA GAGCCATTGA ATTGGATCAA AAACAAAGCT TACTTCACCA ACATATTTCT
AATCAATTAA CGCAATTAAA CCAAGGAATA TTGTCACTGG TTGAAAAGCA AGGTGAGTTA
GCCAAAAAAA CCAGTCAACA ACATCAAAAA TTGGTTTCTT GGTCCCAGAA CGTATTTTTA
ATTACCACCT TATTATCCCT TATTGTCATT GTCTTTGTGA TGTGGAAGGT GGTTTATCAA
GGTATTGTTT TTAAGCTGCA AAAGCATACC GACGCAATAG AAAGATTAGC CGCTGGTGAT
TTAGAGATTA CGGTCGAGTC ATCAAATGAT GAAGAGTTAA AACATTTAGC TGAAGCGCTC
GATGTTTTTC GAGAGCATGC GATTAAAAAG CAACAGCTTG AGTATGAGCA GCTTCAAACA
GAGCAAGAAT TACGTTTGCA TAAAGAAAAC CTTGAGCAAT TGATAAATAT TAGAACGCAA
GAGTTAAGGT TTACCAATGA GAAGCTAAAC AGTGAATCTA AAGCGCACGC CTTAGCAAAG
CAGCAAGCAG ACGAAGCTAA TAGAGCTAAA TCGGTATTTT TAGCGAGCAT GAGTCATGAA
ATACGTACGC CAATGAATGG CATGATCGGC ACATTAGAGT TGTTAACCGA TACCAAGCTC
ACGTCAGAGC AGCAAAAGTA TGCTCAAACT ATTTTATATT CAGGCGAAAG TTTATTAGAT
ATTCTGAATG ATATTCTTGA TTATTCAAAA ATTGAAGCAG GCCATATAGC GCTTTCTTAC
CGTGCCATTG ATTTAGGCAA GCTAGGGGAA GATGTCGTGC ATTTAATGCG AGCAAGAGCG
CAGAATAAAT CATTGCAGCT GCACTTTGAA AAAAAAGGAA ATATTGAAAA CTGGCGCGTT
GCTGATTTAG GTAAGTTACG ACAAATATTA ATAAACTTGA TTAACAATGC CATTAAGTTT
ACTCAACGGG GCAGTATTGT TTTATCAATA GGCGTTAATG ATGAAAGTAG TTCTGGAGAT
TCAGAGGTAA CATTTTCAGT GACTGATACC GGCTGCGGTA TTGCTAAAGA CAAGCAAGCT
GACGTTTTTC AGGCGTTTAC TCAGGTAGAT AATCTTCAAA GTGCTGTCGG CACAGGCTTG
GGTCTAGCAA TATGCCAGCG ACTTGTCAGT GCAATGCAAG GCACTTTATC TCTTGAAAGT
GAAGAAAATC GTGGCAGTTG TTTTGCCTTT ACGATTCCAT TAGCTCGAGC TTCAGCAGAA
GCGATTAGCG CACAGCAAGT ACTATTTTTG CCACCACAAG CGTTATCTCA ATATTATCAG
GTGCTTATTG TCGAGGATAA TGAAATAAAC CTTGATGTCG CCTGTGCCTT GGTTGAAAAA
CTGGGTCATA AAGTAACAGC CGCCAAAGAT GGTGCTAGCG CGCTGAAATG TATGCACAAC
AATCGATTTG ATTTAGCCTT ACTCGATATC AATCTACCTG ATATTGATGG CGTGACTTTA
TCTCAACAAC TCAAGGTTAT TGCGAAAGAA AAGCAGACTC CTTTCAAAAC TATTGCAGTG
TCAGCTCATG TTTTTAATGA AGATATAGCT AAATTTATAA AGTCAGGCTT TGATGGTTTT
GTTGCCAAAC CCGTGCAAAT GAAAAAATTA AAACCAAGTA TTGCCAAAGT AATGTTTAAT
GTTAGAGGAT TCGTTAATCA GGAAGTCGAA GGTGGGGCTG AGCAAGAAAC GGAACCTTGT
CTTGAACTAA AAGTTGAAAT GCCTGAAGCC GTAGTCATTG CTTCAACGAA TAAGGACTCT
CTAGTTGAAA GTCAGGAGCT TAGTGAATTT TTATTATTTG ATGCCGATAT TCCCAACCAA
GATATTGAGT ACTTGGGCAG TGATAAAGTA ATACAACTTA CTCGGTTATT TTGTCAACAA
ATAGATAACG AATATAGTAA TTTTTCAAGT TTATCGGCCA TTGATCAACA CGCAAAATTA
CATAAACTTA AAGGCGCTGC CATCGGTTTA GGTTTGGTTC GGTTATACCA ACTTTGTCAC
ACACTTGAAA TCAACACTGA AGATAATAAA CTGACCTCTT CACAGTTACT TATGATTAAA
GATTTAGCTC AATTATCGAA GCAATCGCTT AATCAATATG CGCAAAGCCT TAAAAATATT
TAG
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| Protein sequence | MHFRRSIGNK LLFAFSFVAG LLLFVSIVAW NGLSLIASTG DIITQQTLPT LSSARELANL
SLQITHKTTL LKNVTDEEQR QEISQTLTLL HLAVEDKFIA LELLNLNKKN LPSLISLKKD
INQGIEQLDL YAKNKITNQQ QRDQAFTVVK ASVHEISVLS QSQVANASTF ALVRLSGLYD
LIEQKSNLLQ AKQDIDLIID EDLNLLDKMA ALERNALELE QIANLVITTQ QYQPLNELTH
NKNRLVLLIS NLVDSITDPY RANLANIALI KLNLFDNLLD NQQRAIELDQ KQSLLHQHIS
NQLTQLNQGI LSLVEKQGEL AKKTSQQHQK LVSWSQNVFL ITTLLSLIVI VFVMWKVVYQ
GIVFKLQKHT DAIERLAAGD LEITVESSND EELKHLAEAL DVFREHAIKK QQLEYEQLQT
EQELRLHKEN LEQLINIRTQ ELRFTNEKLN SESKAHALAK QQADEANRAK SVFLASMSHE
IRTPMNGMIG TLELLTDTKL TSEQQKYAQT ILYSGESLLD ILNDILDYSK IEAGHIALSY
RAIDLGKLGE DVVHLMRARA QNKSLQLHFE KKGNIENWRV ADLGKLRQIL INLINNAIKF
TQRGSIVLSI GVNDESSSGD SEVTFSVTDT GCGIAKDKQA DVFQAFTQVD NLQSAVGTGL
GLAICQRLVS AMQGTLSLES EENRGSCFAF TIPLARASAE AISAQQVLFL PPQALSQYYQ
VLIVEDNEIN LDVACALVEK LGHKVTAAKD GASALKCMHN NRFDLALLDI NLPDIDGVTL
SQQLKVIAKE KQTPFKTIAV SAHVFNEDIA KFIKSGFDGF VAKPVQMKKL KPSIAKVMFN
VRGFVNQEVE GGAEQETEPC LELKVEMPEA VVIASTNKDS LVESQELSEF LLFDADIPNQ
DIEYLGSDKV IQLTRLFCQQ IDNEYSNFSS LSAIDQHAKL HKLKGAAIGL GLVRLYQLCH
TLEINTEDNK LTSSQLLMIK DLAQLSKQSL NQYAQSLKNI
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