Gene CPS_1824 details

Gene Information

• Locus tag: CPS_1824
• Symbol: ribA
• ID: 3520366
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1873746
• End bp: 1874360
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637284286
• Product: GTP cyclohydrolase II
• Protein accession: YP_268554
• Protein GI: 71279904
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.228717
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTTAA ATGAAAGCAT ACCCGCAATA AGAGCACGGG TAAAGTTAAG TATAAAAGAA 
GATATTCCGG CAGAAATCAT CAGTTTTACT GGTCTTGTTG ATGATAAAGA ACATATTGCC 
ATAGTATTTA AAAGCGCAGA CAAACAGCAG AAATCTCCTT TAGTAAGAGT TCATTCTGAA 
TGTTTGACGG GCGATCTATT CCATTCTTCT CGATGTGATT GCGGTGAACA GTTAGACGAA 
TCAATCAACA TAATGAAAGA TAATGGCGGG ATAATTTTAT ACCTGAGACA AGAAGGGAGA 
GGCATAGGTT TATATAACAA ACTAGATGCA TATCTTTTTC AAGAGCAGGG GATTGATACT 
TATGAGGCGA ATAGAAAACT AGGCTTCAAT GACGATGATA GAAACTATGA TGACGCAATA 
AATATGCTCA AAGCACTGAA TGTTTCGAGT CTACATCTAT TAACGAATAA TCCATTAAAG 
ATAGACGCTA TTGGCAAAGA AATATTGATT GAGTCGATTC AAAATACCAA AACTTATTTA 
AAAAAAGATA ATAAAAATTA TCTTTTAGCT AAATATGAAT TATCAGATCA TCAATTAGAA 
TCGTCATTAA TTTAA 

 

Protein sequence

MTLNESIPAI RARVKLSIKE DIPAEIISFT GLVDDKEHIA IVFKSADKQQ KSPLVRVHSE 
CLTGDLFHSS RCDCGEQLDE SINIMKDNGG IILYLRQEGR GIGLYNKLDA YLFQEQGIDT 
YEANRKLGFN DDDRNYDDAI NMLKALNVSS LHLLTNNPLK IDAIGKEILI ESIQNTKTYL 
KKDNKNYLLA KYELSDHQLE SSLI