Gene CPS_1727 details

Gene Information

• Locus tag: CPS_1727
• ID: 3521280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1777391
• End bp: 1777825
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637284190
• Product: hypothetical protein
• Protein accession: YP_268465
• Protein GI: 71280811
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAA TAACATCCCA ACCAAACGTT GAATCAGCCC ATCATTTCGC AATTCGTGTC 
TATTACGAAG ATACCGATGC CGGTGGAATT GTCTATTATG CGAACTATTT GAAATTTTTT 
GAACGCGCGC GAACAGAGTG GCTTAGAAAA ATAGGCATAA ACCAAGAAGT ATTTTTGCAA 
CAAAAGTTGG GTTTTGTGGT CAGAAAGGTT GAAATGGACA ATGTTGCCTC GGCAAAACTT 
GATGATTTAC TTGAAGTGAG TTCAACCATC ATAACGCTGA AGCGTGCAAG TTTAGTGTTT 
CAACAACAAA TTACCAACCA AGAAAAACAA GTATTGTGTA CTGCTAAAAT ACGTATAGCG 
TGCGTTGATT TTAGTCAAAA TAAACCCTGT GCTATTCCCG AATTAATACT AGGAGCGTTT 
AAACGTGTCA GCTGA 

 

Protein sequence

MSEITSQPNV ESAHHFAIRV YYEDTDAGGI VYYANYLKFF ERARTEWLRK IGINQEVFLQ 
QKLGFVVRKV EMDNVASAKL DDLLEVSSTI ITLKRASLVF QQQITNQEKQ VLCTAKIRIA 
CVDFSQNKPC AIPELILGAF KRVS