| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1672 |
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| Symbol | |
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| ID | 3519016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1720905 |
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| End bp | 1721801 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284135 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_268410 |
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| Protein GI | 71278370 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.127951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATA TAAAACAGCT ATCTCGATTA ATAATATTTG CTGAAGTAGT GCAACAAGGT
TCATTTACTG GCGCTGCAAA ACAATTAGGC ATTACGAAAT CAGCCGTAAG CCAACAAATA
AAATCACTCG AAGCTGATAT GGATATTCGT GTGTTAAACC GTACTACCAG AGGAGTATCA
ACTACGGCTT TAGGACAAAA ATTGTTATCT AGATGTCAGG TATTAAAAGA TCAGGTAGAT
TTGATTTTCA AAGATATAGT GAATGCTGAA GAGAACCCAA GAGGTCGATT TGCTATTACC
TTGCCACATT CTTTAGAAAG TAACGTGGTG ATGCCGGCCA TTGAACAATT ATGTATTGAA
TACCCAGGAA TTGAGCCTGA GATTATTGTG AGTGATAGTA GCTTAGATTT AGTTGAAAAT
AATTTAGATG TTGCTATTCA TGCCGGCGAT TTACCTGATA GTAGTTATCG CGCCCTACCT
ATAGGTACTA TCACTGAAAT ATTTTGCGCT ACTCCACTGT ATTTAAATAA AAACTTTACG
CCTCAAAAAT TATCAGATTT AGCACAATTA AAATGGATTT CTACCAGCTG GCAAAAACAA
AAAATGTCAG TTTACAATAG TACGAATAAA GAGAAAGTAA CGATTGAGCT TACACAATTT
TCAAAGGTAA ACACTTTTTC TACTGCACTA GCTATGGCAC TTCGGCATTT GGGTCTCGTG
CTCTTACCTG ACAACGTAGC AAAACCTCTT ATAAAGTCAG GAGAACTGGT TCACATAATG
GAGCAATTTA CCGGCCCTGT GTGGCCTGTA CATACATTAC ACGCATATCA AAGAGAAAAG
CCGGTTCATT TAACTAGGTT TCATCAATTA CTTTGCAATC ATTTCCATAA TTTATGA
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| Protein sequence | MDNIKQLSRL IIFAEVVQQG SFTGAAKQLG ITKSAVSQQI KSLEADMDIR VLNRTTRGVS
TTALGQKLLS RCQVLKDQVD LIFKDIVNAE ENPRGRFAIT LPHSLESNVV MPAIEQLCIE
YPGIEPEIIV SDSSLDLVEN NLDVAIHAGD LPDSSYRALP IGTITEIFCA TPLYLNKNFT
PQKLSDLAQL KWISTSWQKQ KMSVYNSTNK EKVTIELTQF SKVNTFSTAL AMALRHLGLV
LLPDNVAKPL IKSGELVHIM EQFTGPVWPV HTLHAYQREK PVHLTRFHQL LCNHFHNL
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