| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1598 |
|---|
| Symbol | dxnG |
|---|
| ID | 3519925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1643400 |
|---|
| End bp | 1644119 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637284061 |
|---|
| Product | 3-oxoadipate CoA-succinyl transferase, alpha subunit |
|---|
| Protein accession | YP_268340 |
|---|
| Protein GI | 71279466 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.844563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAT TCGACAAAGT AGTGTCAAGC TATGAGGAAG CCATGGCTGG GCTAACAGAT
AACATGACCG TTATCGCAGG TGGTTTTGGT TTATGTGGTA TCCCAGAAAA CTTGATCAGT
GAAATCAAGC GCAAAGGGAC TAAAGGTTTG ACCTTAGTTT CGAATAATTG TGGTGTTGAT
GATTTTGGCT TAGGTGTTTT ATTAGCTGAT CGACAAATAA AAAAAATTGT TGCCTCTTAT
GTGGGTGAGA ATGCTGAATT TGAACGCCAA ATGATGGCGG GAGAACTCGA AGTTGAATTA
ACACCACAAG GTACGCTTGC AGAAAAGATG CGTGCAGGTG GTGCTGGTAT TCCAGCTTTT
TACACGGCAA CAGGTGTTGG TACGCCTGTA GCTGAGGGCA AAGATGAACG AACATTTAAT
GGCCGTGAGT ATATTTTAGA AGAAGCTATT ACCGGTGATT TTGCGATTGT CAAAGCATGG
AAAGCCGATA GATACGGTAA TTTAGTTTTT AGAAAAACGG CTCGAAACTT TAACCCTATG
GCAGCAACTG CTGGCAAGAT TACCGTTGTT GAAGTAGAAG AAATAGTTGA AGTGGGTGAG
TTAGATCCAG ACCAAATCCA TACACCTGGT ATTTATGTTG ATCGCTTAAT TCAAGGCACT
TTCGAAAAGC GTATTGAACA ACGTACTGTT CGTCCATCTT CAGCACAAGG AGCAAAATAA
|
|---|
| Protein sequence | MAGFDKVVSS YEEAMAGLTD NMTVIAGGFG LCGIPENLIS EIKRKGTKGL TLVSNNCGVD
DFGLGVLLAD RQIKKIVASY VGENAEFERQ MMAGELEVEL TPQGTLAEKM RAGGAGIPAF
YTATGVGTPV AEGKDERTFN GREYILEEAI TGDFAIVKAW KADRYGNLVF RKTARNFNPM
AATAGKITVV EVEEIVEVGE LDPDQIHTPG IYVDRLIQGT FEKRIEQRTV RPSSAQGAK
|
|---|
| |