Gene CPS_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1478 
SymbolflgC 
ID3520957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1517743 
End bp1518174 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content43% 
IMG OID637283941 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_268220 
Protein GI71280491 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTT TTAACGTATT TGATATTACC GGTAGTGGTA TGAGCGCACA ATCAGTCCGC 
CTAAATACTA CCGCGAGTAA TATTGCCAAC GCTGATAGTG TTAGTAGCAG TGCCGATAAA
ACTTACCGTG CGAGACACCC TGTTTTTGCC GCTGCCATGC AAGAAGCTGC CGCAGGGCAG
GGGAAAAGTG ATGGTAGTGG GGTTGGTGTA AACGTTTTGG GTATTGTTGA AAGTGATAAA
CCATTGAATG TGGAATATGC ACCGAGTCAT CCTATGGCTG ATAAAGATGG TTATATCTAC
AAACCGAATG TTAATGTCAT CGAAGAAATG ACTAACATGA TTTCAGCATC TCGGTCGTAT
CAAACGAATG TCCAGTTAGC AGAGTCTGCC AAGAATATGT TGAATAAAAC ATTACAGTTA
GGGCAGAGAT AG
 
Protein sequence
MSLFNVFDIT GSGMSAQSVR LNTTASNIAN ADSVSSSADK TYRARHPVFA AAMQEAAAGQ 
GKSDGSGVGV NVLGIVESDK PLNVEYAPSH PMADKDGYIY KPNVNVIEEM TNMISASRSY
QTNVQLAESA KNMLNKTLQL GQR