| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1461 |
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| Symbol | |
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| ID | 3519144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1504233 |
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| End bp | 1505597 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637283924 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_268203 |
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| Protein GI | 71278264 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGACC CGCTTCTTGA TGAATCACTC GGCTTTAATG CGTCCTACCC TAGCAGCTAT
TGGGCTGATG TCGCAGGAGT AGCCCCTAAA GATGATGGTC AGTTAAATAA AGATATCACT
GTTGATGTTG CCATTATAGG CGCCGGATAT ACTGGCTTAT CAACAGCACT GCACTTAGCG
CGTGATCACG GTATCAAGGC GACTGTACTA GAAGCCAATC GAACCGCTTG GGGAGCAAGT
GGCCGTAACG CTGGTTTTAT TTTAAAGTCC TCCGGGCGTA AACCCTATGC AAGCATGCAA
TCTCAATGGG GAGAAGAGGT TATGCGAGGC ATTTACCAAG AGATGTGTGC GGGCGTAGAT
ACTGTCAAAA GTTTAATCGC TGAAGGCATT GATTGCGAGC CACAAGAAAG TGGTTATATT
CGTGTAGCTC ACAAGCCCGC TATGTTCAAA AGTTTACTTG CCACGGCAGC ATTACAAAAA
AAGATGTTTG GCTATGATAT CCAAGAAATA AGTCGTGAAC AGCTACACCA ACAGTATATG
GCAGATAACA ATGCTTATGG TGCAATACGC TATCAAGATG GTTTTGGTAT TAACCCATTA
AAACTGGCGT GGGGTTATCA AAAACTAGCT CGACAAGCCG GTGTCACCAT TCATTGTGAT
ACTTCAGTAG AAAAGTGGCA TCAAGAAACC TCTGATAAAA AAGATCAACA AAGCCAAACA
ACACAAACAT TACACACACC ATCTGGCATT GTAAAAGCTA AAAAGGTTGT TATTGCGACT
AATGGTTATT CAGCCAAAAA TTTCCATCCT TTAATTAAGA GCAAGAGCCT ACCTGTACTC
TCGCAAATAA TTGTTACTCA ACCACTAACA CCTGAGCAAT TGGTCGCTTG TAACTTTTTA
ACAAGCAATG TCATCATGGA TACGCGGGCA TTGAAATACT ATTATCGAAA GTTACCTGAT
AATCGTATTT TATTTGGCGG TCGAGGGGCG ATAACCGGAA AAAATGCAGC AGATCCATAC
TATGCTAATC GCTTACTCGC GGTATTGAAA ACCAGCTTTC CTTCACTCTC AACACTACGC
TACGATTATG CTTGGTCAGG CTGGTTATGT ATGTCATTAG ACGATATGCC TCATGTTTAT
CAAAATGAAC AACAAAGTGT TTTTTATGCC ATGGGCTACT GTGGCAGCGG CGTGTCTTTT
TCGGTACAAG CTGGTAAGCG TTTAGCTGAA AAGGTGGCTG GAGTTACAGT GCCCAATTTA
CCCATTTACC AAACGCCATT AGCAACATTT CCCTTCGCAC CGTTAAGGCG TATTGGCCAA
TGGGGCTATT TTCAATACGG TAAAATAAAA GACCGCTGGC TTTAA
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| Protein sequence | MYDPLLDESL GFNASYPSSY WADVAGVAPK DDGQLNKDIT VDVAIIGAGY TGLSTALHLA
RDHGIKATVL EANRTAWGAS GRNAGFILKS SGRKPYASMQ SQWGEEVMRG IYQEMCAGVD
TVKSLIAEGI DCEPQESGYI RVAHKPAMFK SLLATAALQK KMFGYDIQEI SREQLHQQYM
ADNNAYGAIR YQDGFGINPL KLAWGYQKLA RQAGVTIHCD TSVEKWHQET SDKKDQQSQT
TQTLHTPSGI VKAKKVVIAT NGYSAKNFHP LIKSKSLPVL SQIIVTQPLT PEQLVACNFL
TSNVIMDTRA LKYYYRKLPD NRILFGGRGA ITGKNAADPY YANRLLAVLK TSFPSLSTLR
YDYAWSGWLC MSLDDMPHVY QNEQQSVFYA MGYCGSGVSF SVQAGKRLAE KVAGVTVPNL
PIYQTPLATF PFAPLRRIGQ WGYFQYGKIK DRWL
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