Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1423 |
Symbol | |
ID | 3520334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1461603 |
End bp | 1462709 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283887 |
Product | hypothetical protein |
Protein accession | YP_268166 |
Protein GI | 71279872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.146235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TAACAAAAAT AGCCGTCATT AGCCTAATTG CCTCCAGTAT CACTTTGACT TCTTTTACTG CTAGCGCAAA TCCTAATCTT GAAGAGAAAA CTACTGAAGC CACTTCACAG CAAGTAAGTA ATAAAAATAC TGTTGTGGTT AGCAGTGACA AGAATGAACA AACAACTAAT GCGGGTCAAA ACAATAAAAC TTCCGAGACT ACGGCAGCAA AGATTATTGT CGATAATGAA AATCCAACTA AAGCCGTGAA TGCACAGAAA GAGTCAACAA CTGACTCAAC AGAGGATGAA GACTTCTCTG TTTGTTTCGG CGAATGTGAA AACCATGAGT CTAGAAACTG TGATGAAGGT GATGATAAGT GTGAGAAAGT TCATCGTCTA ATCTATAATC GTCGTGATGG GTTTTATGTT GATGTCAGTG CTATAAGCAG CTTTGGTGAT GATTATGCTT TTTCTGCGAA TGAAGATACT GAATCAGAGT TTGATGTAGC GATAAGTTAC CGAGTACAGT TACTCGGACT ATTTATGGAA TCACCCGGAA TAAGTACTAG ACGAATTCAA GGTATGTACT CTATGCCAGC TTGGGGAGTA AACTTCTATA ATAGTGATGA TTATTCTTTT GATTTATTTT ATCAATACAG TACGCGAGGC ATTGAAGGTT TAGAAGGCAT TCAAACGCGT AATGAAGATG AACGTGCAGG TCTGAGAATG ACAGGCTTTT ATGAAAACAG TCAATTGCAA TTGATATACT CACCCGTTAG TCGCAATGGT GAAGGCAGTG ACGGTATCGA GGCTTCTATT TCATACAGCT ATGACTGGCA GGTTAGAAAC TGGAATTTGT ACACTAACTT AGGGTTGCAA TACCGTTCAA AAGAAGTAAC CCCATATGGC GTAAAAACCT GGGTTGAAGA TGACTTATCA ACGAAAGCGG GTATCAGTTA TTCGGCAGAA GTTGGCATTG AATATCCGCT AACAACCGAT TGGGTTATCG GTAGCTACGT TGGTTATAAC GCACTGTCAG ATCGTAGTAT TTCTACTCGC CAAGATACCG TTGAAGACGG TGTCAGAGGC GGTATTCTAC TCACTTTCGT TTTTTAG
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Protein sequence | MKNITKIAVI SLIASSITLT SFTASANPNL EEKTTEATSQ QVSNKNTVVV SSDKNEQTTN AGQNNKTSET TAAKIIVDNE NPTKAVNAQK ESTTDSTEDE DFSVCFGECE NHESRNCDEG DDKCEKVHRL IYNRRDGFYV DVSAISSFGD DYAFSANEDT ESEFDVAISY RVQLLGLFME SPGISTRRIQ GMYSMPAWGV NFYNSDDYSF DLFYQYSTRG IEGLEGIQTR NEDERAGLRM TGFYENSQLQ LIYSPVSRNG EGSDGIEASI SYSYDWQVRN WNLYTNLGLQ YRSKEVTPYG VKTWVEDDLS TKAGISYSAE VGIEYPLTTD WVIGSYVGYN ALSDRSISTR QDTVEDGVRG GILLTFVF
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