| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1356 |
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| Symbol | |
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| ID | 3519171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1399274 |
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| End bp | 1400497 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283820 |
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| Product | AcrA/E family efflux transporter MFP subunit |
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| Protein accession | YP_268099 |
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| Protein GI | 71278213 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACAT TTCGTTTTAT GTTAAATGGT CAACTAAAAC CATTTTTTAG TCGCCTCTTA
TTCGTATCAT CCAGCGTACT ACTTGCTACA GCACTTACAG GCTGTGAACA AGCACAACAG
TCTGCCCCGA AAGGTATGCA ACCTGCAGCA GTGTCTGTGA TGAGTATGAC AACCCAATCA
GTTCCTTTTA GTATTGAATT ACCTGCCACG TTATCTGGCG CTAAAGAAGT GGAAATTCGT
GCTCAAGTAT CCGGTATTTT ACAAACCCGT AACTTTAGTG AGGGTGATAA AGTCACAGCA
GGACAATCAT TATTTAGCTT AGACGCTAAA ACTTATGCCG CTGAAATGGC CAAAAGCAAA
GCAGATTTGA ATGCTGCGAC GGTCCGTCTG GAACAAGCCC AACGTGAAGT TAATCGCATA
AGGCCATTAC GTGAGAAAAA TTCAATTTCA CAACGCGAGT TAGACAATGC CATTTCAAGT
GCTGACATTA ATTTAGCTGA TGTTAAATCA ATGCAAGCGG ACTTAGAACA AGCGAAATTA
CGCTTAGATT ATACTAAGGT AATATCTCCT GTTACCGGTA TTGTTGGCCG TGAATTAGTG
TCAGAAGGAA CTTATGTTTC AGGCCCTGAA GTATTGTTAA CACAATTAAC CCAAATTGAT
CCTATTCGTG TGCGTTTTGG TTTATCTGAA CGTGAGCAAT TACAAATGCG TAATGATGAA
GCTGCAGGCT TACTTACTTT GCCAGAAGAA GGCCATTGGA ACACCAGAAT TAAATTGTTT
GATGGTTCAC TCCACCCTCA AGTTGGACAA GTTAACTTCA GCGACATCCG GATAAATAGT
CAAACAGGCA CAAGTGAATT ACAGGCAATT ACACCAAATC CAAACTTTTC ATTGAGACCC
GGACAATTTG TTCGCATCAT TTTAGAAGGT GCTGTACGTG AAAATGCCTA TGTTGTACCG
CAAAGAGCCG TTTTAGATAA TGGTCTTGGA AAATTTGTTT ATGTTATGGC TAAAAATGAC
AAAGGTATGA CTGTCGCATT ACCTGCTCCC GTTGTTGTCG GCGAATGGGT AACTGAGGTT
GCAGGTATAG AAAATGGCTG GATAATTCGT GAAGGTTTAA AAACAGGCGA CCAAGTCATT
ATTGATGGCA TGGCGCGTAT TTTCTTTCCA GGTATGCCGA TACGTTTAGC TGATGATCAG
TTACCGTCTG CCGCACAGCA ATAA
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| Protein sequence | MSTFRFMLNG QLKPFFSRLL FVSSSVLLAT ALTGCEQAQQ SAPKGMQPAA VSVMSMTTQS
VPFSIELPAT LSGAKEVEIR AQVSGILQTR NFSEGDKVTA GQSLFSLDAK TYAAEMAKSK
ADLNAATVRL EQAQREVNRI RPLREKNSIS QRELDNAISS ADINLADVKS MQADLEQAKL
RLDYTKVISP VTGIVGRELV SEGTYVSGPE VLLTQLTQID PIRVRFGLSE REQLQMRNDE
AAGLLTLPEE GHWNTRIKLF DGSLHPQVGQ VNFSDIRINS QTGTSELQAI TPNPNFSLRP
GQFVRIILEG AVRENAYVVP QRAVLDNGLG KFVYVMAKND KGMTVALPAP VVVGEWVTEV
AGIENGWIIR EGLKTGDQVI IDGMARIFFP GMPIRLADDQ LPSAAQQ
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