Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1203 |
Symbol | |
ID | 3518501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1235097 |
End bp | 1235939 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637283667 |
Product | hypothetical protein |
Protein accession | YP_267946 |
Protein GI | 71278751 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.897132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTG AAAATGCTCT ATATGAGATT TTGACTGAAA AAATAAAACA AGACACGCTT GTACTTCCAA CTTTACCTGA AGTAGCATTG AAAGTTAGAA GTGCTGCTGA TGATCCTGAT ATTAATTTAA ATCAAATGAG TGACATCATT GCTCATGACC CCGCTTTATC TTTAGGTATG CTCAAAGTTG CCAATAATGC TCTTATGGGT CGTAGTATAA AAGTAGAAAC GGTACCACAA GCTGTAACTC GTATTGGCTT AATCCAAATT AAAAGTATTG CTACAGCAAT GGCTATTGAA CAAGTCTTTG TTTCTAACAA TGATGTTGTG GCTATGTATA TGAACAAGGC ATGGGTTAAA ACTATTGATA TAGCATCAGT TGCCATTAGC TTGATGAATA TATACCTAAA AGAAAACAAA CATACGTCAC TCTCTTTAGA TACTATTACT TTAGCTTCGT TAATACATAA TATTGGTGTT TTACCTATTT TAACTGAAGC AGAAAACCAT CCTGATGTTT TTGCCAACCC GACTTTTTTA CAACAAGCCA TTATTAAGTT ATCAGGGCGA GTAGGTGGAG CTATAACTCG AAAGTGGGGG TTTTCTGAAG AATTTACGTT ATTAGCCGAG AGTTGGAGTG ATTTAACTAT TTTACCTAGC GAAGTGCATT ATTTGGATTT CATTAGAGCA GGGGCCATTT ATCATAATGT CTTTAAAAAT GAGTCAACTA AAGTAGCATT ATTGAACAAT TATACCAAAA AAGGCATTTT ACCTGAAGTT GATTACATGG ATAGTGATGA ATTTAAAGGC ATGTGTGAAG ACGTAAGAGC TATGTTTATT TAA
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Protein sequence | MATENALYEI LTEKIKQDTL VLPTLPEVAL KVRSAADDPD INLNQMSDII AHDPALSLGM LKVANNALMG RSIKVETVPQ AVTRIGLIQI KSIATAMAIE QVFVSNNDVV AMYMNKAWVK TIDIASVAIS LMNIYLKENK HTSLSLDTIT LASLIHNIGV LPILTEAENH PDVFANPTFL QQAIIKLSGR VGGAITRKWG FSEEFTLLAE SWSDLTILPS EVHYLDFIRA GAIYHNVFKN ESTKVALLNN YTKKGILPEV DYMDSDEFKG MCEDVRAMFI
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