| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1105 |
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| Symbol | |
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| ID | 3521857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1126450 |
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| End bp | 1127838 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283569 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_267849 |
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| Protein GI | 71281385 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.210727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAAAG CAGCAAAAAT CGAATTTGTA TGCACCGATT GCGGTATGAA TCATACCCGT
TGGCAAGGAC AGTGCCGTTG CGGAGCATGG AATACCCTGG TAGAAATGAA AATACCAAAA
GCAGCAAGTA AAAATGCAGC TACTCGTACA ACAAGTACCG GTGGTTATGC AGGTTTAACG
GGTGGCGGCT CTAAAAAGAT TAACGAAATA GAATCCATTG ATGCAGAAAA AAGATCAACA
GGTATCGGCG AGCTTGATCG TGTTTTATGC GGAGGAGTGA CAACAGGATC GGTAAATATT
ATTTCTGGCG ATCCGGGCGC AGGTAAAACG ACCCTACTCT CCGATCTTGT CGCTCGTATG
TCAAAAACTC ACGCCTCACT TTATTGTACC GCTGAAGAAT CCCTTTCTCA GTTCAAAAAC
CGTGTGCACC GATTAAAGTT GGATTATGAC GAAGATAACC TTTACCTATT AGCTGAAACC
AGTGTTGAAG CCATCATTGA TGAATTAGAT AAAAACAAAA TTAAGTTTGC GGTAATTGAC
TCTATCCAAG CGGTAGTCAC TGAAAATGCA AATGGCAGTC CTGGCTCTCC TTCACAAGTA
AAAAGCAGTG CGCAATCACT GACCCAGTAC TGCAAGCAAA ATAATGTCAC TATGTTTATT
ATTGCCCATG TAAATAAAAA CAACGAAATT GCCGGCCCGC AAACACTAGT ACACATAGTA
GATGCCCTGT TGCATATTGA TACTAATGAC GGTCAAATTC GTACGCTTAG AGCGAACAAA
AACCGTTTTG GTGATATCGA CACCGTCGGT ATTTTCAAGA TGTGTGAACG CGGTATGCTC
AGTGTTGATA ATCCGAGCGA AATATTTTTA TCGGGTTCTA GTACCGAATC TCCTGGTTCA
ACAATCACCT GTATTCGTAA AGGCAATCGC AATCTGCTGT TAGAAATTCA ATGTTTGACC
ACTGAAACCG AGGCAGAGTT TCCACAACGT GTTTGTGTTG GTTTGAACAT GAACAGAATT
AAAATGTTAA CCGGGATATT GCGTAAACAT ACCAAAACGA AGATATTTCA CGATACCTTT
TTTAATATTG TCGGCGGCTT AAAAATTGAT GAGTCTGAAA CCTGTATCGA TTTAGCCTTG
GTCACAGCAC TATTAAGCAG CCTGAATGAC TTTGTTATAC CTCGTAATAC CTGCATCATG
GGTGAATTGA GCTTAAATGG CGACGTTAGA CCTATAGACA GCGGCGTACC TCGTGTTAAA
GAAGCAGCAC AGCATGGCTT CACCGAAATA TTTATTCCTT ACCGTAATTA TCATAAATCA
ATGGAAGGGC TTGGCGCTAA CATCAAAGCA GTAAAAACCA TTCATGAGCT CATTGAGTTG
ATAAAATAA
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| Protein sequence | MVKAAKIEFV CTDCGMNHTR WQGQCRCGAW NTLVEMKIPK AASKNAATRT TSTGGYAGLT
GGGSKKINEI ESIDAEKRST GIGELDRVLC GGVTTGSVNI ISGDPGAGKT TLLSDLVARM
SKTHASLYCT AEESLSQFKN RVHRLKLDYD EDNLYLLAET SVEAIIDELD KNKIKFAVID
SIQAVVTENA NGSPGSPSQV KSSAQSLTQY CKQNNVTMFI IAHVNKNNEI AGPQTLVHIV
DALLHIDTND GQIRTLRANK NRFGDIDTVG IFKMCERGML SVDNPSEIFL SGSSTESPGS
TITCIRKGNR NLLLEIQCLT TETEAEFPQR VCVGLNMNRI KMLTGILRKH TKTKIFHDTF
FNIVGGLKID ESETCIDLAL VTALLSSLND FVIPRNTCIM GELSLNGDVR PIDSGVPRVK
EAAQHGFTEI FIPYRNYHKS MEGLGANIKA VKTIHELIEL IK
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